KEGG   Dermacoccus abyssi: FV141_04815
Entry
FV141_04815       CDS       T06197                                 
Name
(GenBank) penicillin-binding protein
  KO
K05515  penicillin-binding protein 2 [EC:3.4.16.4]
Organism
day  Dermacoccus abyssi
Pathway
day00550  Peptidoglycan biosynthesis
day01100  Metabolic pathways
day01501  beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:day00001]
 09100 Metabolism
  09107 Glycan biosynthesis and metabolism
   00550 Peptidoglycan biosynthesis
    FV141_04815
 09160 Human Diseases
  09175 Drug resistance: antimicrobial
   01501 beta-Lactam resistance
    FV141_04815
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01011 Peptidoglycan biosynthesis and degradation proteins [BR:day01011]
    FV141_04815
Enzymes [BR:day01000]
 3. Hydrolases
  3.4  Acting on peptide bonds (peptidases)
   3.4.16  Serine-type carboxypeptidases
    3.4.16.4  serine-type D-Ala-D-Ala carboxypeptidase
     FV141_04815
Peptidoglycan biosynthesis and degradation proteins [BR:day01011]
 Peptidoglycan biosynthesis and degradation
  DD-Transpeptidase (Class B PBP)
   FV141_04815
SSDB
Motif
Pfam: Transpeptidase PBP_dimer
Other DBs
NCBI-ProteinID: QEH92919
Position
995609..997690
AA seq 693 aa
MTRLRRGVPRERRPFGPFLVPSFRGAGSRGARGASGRARLLVMALVVALVATIMVGRLVQ
LQIVDGAKNARAAADINTRDVVVPAQRGRILAADGTVLVGNGSTTTLTISPQALARDDAP
KVIARVASAIGRDPLSLLARTKACGTKGAAPSPVCFAGHPFEAVPIASDVEASAANALLE
RPEAYPGIAVRPTATRTYGSRGDSLAQVAGYLTAATADDTGVSSSGSGVPTLLGRTGVEK
QYDAVLRGRDGKRSTAIGPDGTAQRQVADVPPVAGQDVVTSIRPDVQDAAAKALADGIAA
ARKRGQKAGSGSVVVLEADSGNVVAMTNQPTYDPSVWNGGVTQAEYDSLLDTRAGDPLTN
RATSVAGPPASTFKVFSLFAAAQTGVDPNGSYSCPSSVMIGNRSYSNFESQAHGTIDIPK
ALEVSCDTVFYRWAYDAWVKAGGVKASTDAPDPYTSVAREFGYGARTGVDLPAEASGSLP
DRATKRRGWEATKAASCRRAKSGYPEITDKDRASYLTQVAKENCTSGYVVRAGDAVNFAI
GQGDVAATPMQVATSFAALATNGRVPTPRVAVATARSDGSARTALPTPEARTLSLDARMY
ARELEGLKRAVSTGTASEAFRGFDLDAHPVYGKTGTAEVYGKHATAWFASFGEAGVDGKR
YVVVVRVDEGGEGGRTSAPIARSVWDALVGRSR
NT seq 2082 nt   +upstreamnt  +downstreamnt
atgacccggctgcgccgaggcgtgccgagggaacgccgtccgttcggaccgttcctcgtg
ccgagcttccgtggggcaggttcgcgtggtgcgcgaggggcgtcgggacgtgcgcggttg
ctcgtcatggctcttgtcgtcgctctcgtcgcgacgatcatggtgggtcgcctcgttcaa
ctgcagatcgtcgacggcgcgaagaacgcgcgggccgcagcggacatcaacacgcgtgac
gtcgtcgtgcctgcccaacgcgggcggatcctcgctgccgacggtaccgttctcgtcggg
aacggttcgacgacgacgctgacgatctcgccgcaggccctcgcgcgtgacgacgcgccg
aaggtcatcgcgcgcgtcgcctcggccatcggccgggatccgctgagcctcttggcgcgg
acgaaggcgtgcgggacgaagggcgccgcgccgtcgccggtctgcttcgccgggcatccc
ttcgaggcggtgccgatcgcctccgacgtcgaggcgtcggctgcgaacgcgctgctcgag
cgccccgaggcctaccccggcatcgcggtgcgaccgacagcgacccgaacctacggctcc
cgcggcgactccctcgcccaggtggccggttacctcacggcagcgacagccgacgacacc
ggcgtctcgagctcggggtcgggtgtgccgacgttgctcggccgcacgggtgtcgagaag
cagtacgacgccgtcctgcgcggacgcgacggcaagcgctccaccgccatcggccccgac
ggcacggcgcaacgtcaggtggcggacgtgccgccggtggcgggccaggacgtcgtcacc
tcgatccgccctgacgtgcaggacgccgcggcgaaggccctcgccgacggcatcgccgca
gcccggaagcgcgggcaaaaggccggttcgggaagcgtcgttgtcctcgaggcggacagc
ggcaacgtcgtcgccatgacgaaccagcccacctacgacccgtccgtgtggaacggcggc
gtgacgcaggccgagtacgactcgctgctcgacacgagggccggcgacccgctgaccaac
cgagccacgtccgtggccggcccacccgcgtcgacgttcaaggtgttctccctctttgcc
gcggctcagaccggcgtggacccgaacggctcgtactcctgcccgtcgtcggtcatgatc
ggcaaccgctcctacagcaacttcgagtcgcaggcgcacggcacgatcgacatcccgaag
gcgctcgaggtctcctgcgacaccgttttctaccggtgggcgtacgacgcctgggtcaag
gccgggggagtgaaggcgtccaccgacgctcccgacccgtacaccagcgtggcccgcgag
ttcggatacggcgcgcgaaccggggttgacctgcccgcggaggcgagcggctcccttccc
gaccgcgcgacgaagcgccgtgggtgggaggcgacgaaggcggcgtcctgcaggcgggcg
aagagcggctacccggagatcaccgacaaggaccgtgcttcgtatctcacgcaggtggcc
aaggagaactgcacgagtggctacgtcgtacgcgccggtgacgcggtgaacttcgcgatc
ggccagggtgacgtcgccgcgacgccgatgcaggtggccacgtccttcgccgcgctcgcg
acgaacggtcgcgtgccgacgccccgcgtcgccgtggcaaccgcgcgttcggacggcagc
gctcgcacggcgctcccgacgcccgaggcccgtaccctcagcctcgatgcccggatgtac
gcccgtgaactcgaggggctgaagcgtgcggtctcgacgggaaccgcctccgaggcgttc
cgaggcttcgacctcgacgcgcaccccgtctacggcaagacagggacggccgaggtctac
ggcaagcacgcgaccgcctggttcgcctcgttcggcgaggcaggcgtcgacggcaagcgc
tacgtcgtcgtcgttcgggtggacgaaggaggtgagggcggacgaacctcagcgcccatc
gcccgctcggtctgggacgcgctcgtggggcgctctcgctga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
Protein domain (2)   
   Pfam (2)   
All databases (12)   

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