KEGG   Dermacoccus abyssi: FV141_05880
Entry
FV141_05880       CDS       T06197                                 
Name
(GenBank) ribonuclease D
  KO
K03684  ribonuclease D [EC:3.1.13.5]
Organism
day  Dermacoccus abyssi
Brite
KEGG Orthology (KO) [BR:day00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:day03016]
    FV141_05880
Enzymes [BR:day01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.13  Exoribonucleases producing 5'-phosphomonoesters
    3.1.13.5  ribonuclease D
     FV141_05880
Transfer RNA biogenesis [BR:day03016]
 Prokaryotic type
  3'processing and CCA adding factors
   3'processing factors
    FV141_05880
SSDB
Motif
Pfam: DNA_pol_A_exo1 DNA_pol_A_exoN HRDC
Other DBs
NCBI-ProteinID: QEH93111
Position
complement(1249283..1250602)
AA seq 439 aa
MTSDSPAGDNASLEDAQPTDDKPSYPLLAEPADGVPEIVTTAARLKECCAAIRAGSGPVA
IDAERASGFRYGNDAYLVQLRRKGSGTWLIDPVPCSDLSSLNAAIGKAEWVLHAATQDLA
CLKALGLYPKALFDTELGSRLAGLARVGLAAVTEHYVGVTLAKEHSAVDWSTRPLPHDWL
VYAALDVERLVEVRDALAADLEAQGKGEWARQEFEALLDFEGPTPKKDPWRRTSGLHALR
DPRQVARVRSLWQTREDIAQRRDTTPGRVLPDALIIDLARRNPNDLAGLVGPPAIRPRVG
DGSARRRRPRPAHRGLARYGERWLNALKNADALPQRELPPLTMRTNAPPPIRAWADRNPA
AAGRLDDVRYGLQQFSEKRNVPVENLVTPDLLRRTIWSPPADQSDAGWREALAAGGARPW
QCDIVAPLLAEAALDHPTN
NT seq 1320 nt   +upstreamnt  +downstreamnt
atgacgtccgactcccccgccggcgataacgcgtcgctcgaggacgcgcagccgaccgac
gacaagccgagctatcccctgctcgccgaaccggctgacggcgttcccgagatcgtgacg
acggccgcgcgcctcaaggagtgctgcgccgccatccgcgccggctccgggcccgtcgcc
atcgacgccgaacgcgcgtcgggcttccgctacggcaacgacgcctacctcgtccagctg
cggcgcaagggttcgggcacctggctcatcgacccggtgccgtgcagcgatctcagcagc
ctgaatgccgccatcggcaaggccgagtgggttcttcacgccgcaacgcaggatcttgcc
tgcctcaaggccctcggtctttacccgaaggcgctgttcgacaccgaactcggcagccgc
ctcgccggcctcgcccgcgtcgggctcgccgccgtcacggagcactacgtcggcgtcacg
ctcgccaaggagcactcggccgttgactggtcgacgcgtccgctgccccacgactggctc
gtctacgccgcgctcgacgtcgagcgtctcgtcgaggtgcgtgacgccctggccgccgac
ctcgaagcccagggcaagggcgaatgggcccgtcaggagttcgaggcgctgctcgacttc
gagggcccgacgccgaagaaggacccctggcgtcgcacgtccggtctccacgcgctgcgc
gatccgcgccaggtcgcccgggtgcgttcgctgtggcagacgcgcgaggacatcgcccag
cgccgcgacacgacgccgggtcgcgtgctgcccgacgcactcatcatcgatctggcccgc
cgcaaccccaacgacctcgccggtctcgtcggcccgcccgccatccgcccacgcgtcggt
gacggctcggcccgacgccgccgtccgcgccccgcgcaccgtggactcgcgcgctacggc
gagcgctggctcaacgcgctcaagaacgccgacgccctgccgcagcgcgagctgccgccc
ctcacgatgcgtacgaacgctcccccgccgatccgggcgtgggccgatcgcaacccggct
gccgccggtcgtctcgacgacgtccgctacggcctccagcagttcagcgagaagcgcaac
gtgcccgtcgagaacctcgtgacgcccgatctcctgcgccgcaccatctggtcgccgccg
gccgatcagagcgacgccggatggcgtgaagccctcgccgccgggggcgcacgcccctgg
cagtgcgacatcgtcgccccgcttctcgccgaagccgcgctcgatcacccgacgaattga

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