KEGG   Dermacoccus abyssi: FV141_07515
Entry
FV141_07515       CDS       T06197                                 
Name
(GenBank) DNA-directed RNA polymerase subunit omega
  KO
K03060  DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
Organism
day  Dermacoccus abyssi
Pathway
day03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:day00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    FV141_07515
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:day03021]
    FV141_07515
   03400 DNA repair and recombination proteins [BR:day03400]
    FV141_07515
Enzymes [BR:day01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     FV141_07515
Transcription machinery [BR:day03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Core subunits
     FV141_07515
DNA repair and recombination proteins [BR:day03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase complex (RNAP)
      FV141_07515
SSDB
Motif
Pfam: RNA_pol_Rpb6
Other DBs
NCBI-ProteinID: QEH93385
Position
complement(1602103..1602366)
AA seq 87 aa
MSGTKAEPIGITNPPIDDLLEIADSKYALVTYASKRARQINGYYSQLADGLLDNVGPLVE
AQPNDKPLSIALREMNEGLLSIEKLEA
NT seq 264 nt   +upstreamnt  +downstreamnt
gtgtccggcaccaaggccgagcccatcggcatcacgaacccgcccatcgacgacctcctc
gagatcgcggacagcaagtacgcgctcgtgacgtacgcctcgaagcgcgcgcgtcagatc
aacggctactacagccagctcgctgacggcctgctcgacaacgtcggtccgctcgtggag
gcccagcccaacgacaagccgctgtcgattgcgttgcgcgagatgaacgagggtttgctc
tcgatcgagaagctcgaagcctga

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
Protein domain (1)   
   Pfam (1)   
All databases (10)   

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