KEGG   Desulfomicrobium baculatum: Dbac_2624
Entry
Dbac_2624         CDS       T00963                                 
Name
(GenBank) chaperonin GroEL
  KO
K04077  chaperonin GroEL [EC:5.6.1.7]
Organism
dba  Desulfomicrobium baculatum
Pathway
dba03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:dba00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    Dbac_2624
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:dba03019]
    Dbac_2624
   03110 Chaperones and folding catalysts [BR:dba03110]
    Dbac_2624
   03029 Mitochondrial biogenesis [BR:dba03029]
    Dbac_2624
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:dba04147]
    Dbac_2624
Enzymes [BR:dba01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.1  Enzymes altering polypeptide conformation or assembly
    5.6.1.7  chaperonin ATPase
     Dbac_2624
Messenger RNA biogenesis [BR:dba03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   Other RNA degradation factors
    Chaperones
     Dbac_2624
Chaperones and folding catalysts [BR:dba03110]
 Heat shock proteins
  HSP60 / Chaperonin
   Dbac_2624
Mitochondrial biogenesis [BR:dba03029]
 Mitochondrial protein import machinery
  Matrix
   Other matrix factors
    Dbac_2624
Exosome [BR:dba04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   Dbac_2624
  Exosomal proteins of other body fluids (saliva and urine)
   Dbac_2624
  Exosomal proteins of breast cancer cells
   Dbac_2624
  Exosomal proteins of colorectal cancer cells
   Dbac_2624
  Exosomal proteins of bladder cancer cells
   Dbac_2624
SSDB
Motif
Pfam: Cpn60_TCP1 divDNAB
Other DBs
NCBI-ProteinID: ACU90701
UniProt: C7LSV1
Position
complement(2991924..2993561)
AA seq 545 aa
MAAKIIKFDAKAREKLKIGVDTLANAVKVTLGPKGRNVVIEKSFGSPIITKDGVTVAKEI
ELEDKFENMGAQMVKEVASKTSDIAGDGTTTATILAQAIFTEGIKLVAAGRNPMSIKRGI
DKAVEAVIASLDKLAKPTRDQKEIAQVGTISANNDATIGNIIAEAMGKVGKEGVITVEEA
KGLETNLDVVEGMQFDRGYLSPYFVTNPDKMVCEMDSPLILINEKKISNMKELLPVLEQA
AKMGKPLVIIAEDIEGEALATLVVNKLRGTLQVVAVKAPGFGERRKAMLQDIAILTGGEV
VSDDLGVKLESIALNQLGSAKRVVIDKENTTIVDGSGEAEAIKARVKQIRNEIEETSSDY
DREKLQERLAKIVGGVAVINVGAATETEMKEKKARVEDALNATRAAVEEGIVPGGGVALV
RCQSALDSVKPADDDEAAGVQVIRRAIEEPIRQICGNAGVEGAVVIDKVRNGKEDFGYNA
ASGEYEDLLKSGVIDPKKVTRIALQNAASVASLLLTTECAIAEKPKEEAAPAMPGGGMGG
MGGMY
NT seq 1638 nt   +upstreamnt  +downstreamnt
atggctgctaaaattatcaagtttgatgccaaggcccgtgaaaaactgaaaatcggcgtg
gacaccctggccaatgccgtcaaggtcaccctcggacccaagggccgcaacgtcgtcatc
gaaaaatctttcggttccccgatcatcaccaaggacggcgtgaccgtggccaaggaaatc
gaactggaagacaagttcgagaacatgggcgcccagatggtcaaggaagtcgcctccaag
acttccgacatcgccggcgacggcaccaccaccgccaccatcctggcccaggccattttc
accgaaggcatcaagctggttgccgccggtcgtaaccccatgtccatcaagcgcggcatc
gacaaggctgtcgaagccgtcatcgcgagcctggacaagctggccaagcccacccgcgat
cagaaggaaattgcccaggtcggcaccatttccgccaacaacgacgccaccatcgggaac
atcatcgccgaagccatgggcaaagtcggcaaagaaggcgtcatcactgttgaagaagcc
aagggtctggagaccaacctggacgtcgtcgaaggcatgcagttcgaccgcggctacctg
tccccctacttcgtgaccaaccccgacaagatggtctgcgaaatggattctccgctgatt
ctgatcaacgagaagaagatctccaacatgaaggaactgctccccgttctggagcaggcc
gccaagatgggcaagcccctggtcatcatcgctgaagacatcgaaggcgaagctctggcc
actctggtcgtcaacaagctgcgtggcaccctgcaggtcgtggccgtcaaggctcccggc
tttggcgagcgtcgcaaggccatgctgcaggatatcgccatcctgaccggtggcgaagtt
gtttccgatgatctgggcgtcaagctcgaaagcatcgccctgaaccagctcggttccgcc
aagcgcgttgtcatcgacaaggaaaacaccaccatcgttgacggttccggcgaagccgaa
gccatcaaggcccgcgtgaagcagatccgcaacgaaatcgaggagacctcctccgattac
gatcgcgaaaagctgcaggagcgtctggccaagatcgttggcggcgttgccgtgatcaac
gttggcgcggccaccgagactgaaatgaaggaaaagaaggcccgcgtggaagacgccctg
aacgccacccgcgctgccgtcgaagaaggcatcgtgcctggcggcggcgtcgccctggtg
cgctgccagtccgccctggattccgtcaagcccgccgatgacgacgaggccgcaggcgta
caggttatccgtcgcgccatcgaagagcccatccgtcagatctgcggcaacgcaggtgtt
gaaggcgcagtggttatcgacaaggtccgcaacggcaaggaagacttcggttacaacgcc
gcttccggcgagtacgaagatctgctcaagtccggcgtcatcgatcccaagaaggtgacc
cgcatcgccctgcagaatgccgcttccgtagcgtccctgctgctgaccaccgagtgcgcc
atcgccgagaagcccaaggaagaggctgccccggccatgcccggtggcggcatgggcggc
atgggcggcatgtactaa

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Ontology (6)   
   KEGG BRITE (6)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (38)   
   KEGG ORTHOLOGY (1)   
   RefGene (35)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (2)   
   Pfam (2)   
All databases (50)   

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