KEGG   Desulfarculus baarsii: Deba_2722
Entry
Deba_2722         CDS       T01284                                 
Name
(GenBank) DNA polymerase I
  KO
K02335  DNA polymerase I [EC:2.7.7.7]
Organism
dbr  Desulfarculus baarsii
Pathway
dbr03030  DNA replication
dbr03410  Base excision repair
dbr03420  Nucleotide excision repair
dbr03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:dbr00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    Deba_2722
   03410 Base excision repair
    Deba_2722
   03420 Nucleotide excision repair
    Deba_2722
   03440 Homologous recombination
    Deba_2722
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:dbr03032]
    Deba_2722
   03400 DNA repair and recombination proteins [BR:dbr03400]
    Deba_2722
Enzymes [BR:dbr01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     Deba_2722
DNA replication proteins [BR:dbr03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    Other elongation factors
     Deba_2722
DNA repair and recombination proteins [BR:dbr03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA polymerase I
     Deba_2722
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     Deba_2722
SSDB
Motif
Pfam: DNA_pol_A 5_3_exonuc_N 5_3_exonuc DNA_pol_A_exo1 HTH_20 HHH_5
Other DBs
NCBI-ProteinID: ADK86076
UniProt: E1QKI3
Position
complement(3017692..3020364)
AA seq 890 aa
MPDKPTIFLLDASGYIHRAFHAVKGLATSDGVPTGAVFGFVNMLLKVLAEARPSHLAVVY
DAKGPTFRHQIFPAYKANRPPMDPALKAQLPLVRQLVTALCLPAVEMEGFEADDLMATLA
RQAREQGFEVVLVSADKDLLQLVGPGVSLWDTMKDLRLGPEEVRQKTGLPPELQVDMQAL
TGDASDNVPGVPGVGPKTAVKLLAEHPGLEAVLAAAPAMKKSKLRESLIENKDMALLSRR
LVRLRDDAPLRFEPAAFRVVEPDRDVLLPLLTRLEFNKLIKDFAAAGPRPQADYRRLTDL
DELARVLEQAKAAGQLAIDTETTSLDPIRADLVGFSLCVSPGLAYYAPLAHDWPADEPQA
PRRQALDLLGQALADPGLLKIGQNLKYDLNVLRRAGLSVAGPLFDTMVADYLLNPAKASH
GLEAIAAEHLGRGVIGFEEAVGGKGKGFAQAPPERAVPYAAEDADVALQAAQALGPKLDE
ADLRRLFDELEMPLTPLLAKMERYGVLIDAEELGRLSAELDQALAAGEQKIYALAGHEFN
INSTQQLGQVLFDELGLSQVKKTKKRTAYSTDMSVLAILAAQHPLPAEVLAYRANAKLKS
TYVDALPALINPDTGRVHTSFNQCVTATGRLSSSDPNLQNIPVRGELGRRMRGCFVPAPG
RLLVSADYSQIELRVLAHLSQDPLMLQDMAEGLDVHTQTAARIFDVMPGLVTREMRVRAK
TVNFGVLYGMSAFRLAREQGVSRAEAEDIIARYLGRYQGVARFQQQNLSQCRQRGYVTTI
LGRRRFLPAINSSDRQAREAAERVALNTPIQGSAADIIKLAMLRVDEMLTRHYPDSPMIL
QVHDELVFETPEGGVEQFAQAVRRCMEDVLKLDVELKVDVGWGRDWAQAH
NT seq 2673 nt   +upstreamnt  +downstreamnt
ttgccggataagccgacgatttttctgctggacgccagcggctacatccaccgcgccttc
catgccgtcaagggtctcgccaccagcgacggcgtgcccaccggcgcggtgttcggcttt
gtcaacatgctgctaaaggtgctggccgaggccaggcccagccatctggccgtggtctac
gacgccaagggccccaccttccgccaccagatcttcccggcttacaaggccaaccgcccg
cccatggacccggcgctcaaggcccagttgcccctggtgcgccagttggtcacggcgctg
tgcctgccggcggtggagatggaaggcttcgaggccgacgacctgatggccaccctggcc
cgccaggcccgcgagcagggcttcgaggtggttttggtcagcgccgacaaagacctgctt
cagctcgtcggtcccggcgtgagcctctgggacaccatgaaagacctgcgcctgggcccc
gaggaggtgcgtcaaaagaccggcctgccgccggagttgcaggtggacatgcaggccctg
accggcgacgcctccgataacgtgcctggcgtgcccggcgtgggccccaaaacggcggtg
aagcttctggccgagcaccccggcctggaggccgtgctggccgccgcgccggccatgaaa
aagtcaaagctgcgcgaaagtctcatcgaaaacaaagatatggccctgctcagccggcgg
ttggtgcgcctgcgcgacgacgcgccgctgcgcttcgagccggcggcctttcgggtcgtc
gagcccgaccgcgacgtgctcctgcccctgctgacccgcctggagttcaacaaactcatc
aaggacttcgccgccgccggccccaggccccaggccgattatcgccgcctgaccgatctg
gatgagctggcccgcgtcctggaacaggccaaggcggccggccaactggccatcgacacc
gagacgacctccctcgatcccatccgggccgatctggtgggcttttcgctgtgcgtcagc
cccggcctggcctactacgcgcccctggcccacgattggcccgccgacgaaccccaggcg
ccccgccgtcaggccctggatctgctgggccaggccctggccgacccagggctgctcaag
atcggccagaacctcaaatacgacctcaacgtattgcggcgcgccggcctgagcgtggcc
ggccccttgttcgacaccatggtcgccgattatctgctcaacccggccaaggccagccac
ggcctggaggccatcgccgccgagcacctgggccggggggtgatcggcttcgaggaggcc
gtgggcggcaagggcaagggctttgcccaggccccgcccgagcgggccgtgccctatgcc
gccgaggacgccgacgtggccctgcaagcggcccaggccctgggcccaaagctcgatgag
gccgatctgcgccgcttgttcgacgaactggagatgccgctgacgcccctgctggccaag
atggagcgctacggcgtgctcatcgacgccgaggaactgggccggctttcagccgagttg
gaccaggccctggccgcgggcgaacaaaaaatttacgccctggccggccacgagttcaac
atcaactcgacccagcaactgggccaggtgctctttgacgagttgggcctgagccaggtc
aaaaagaccaaaaagcgcacggcctattccaccgacatgagcgtgctcgccatcctggcc
gcccagcaccccctgccggccgaggtgttggcctaccgcgccaacgccaagctcaaaagc
acttacgtcgacgccttgcccgcgctgatcaacccggacactggccgcgtgcacaccagt
ttcaatcagtgcgtcaccgccaccggccggctttcgtcgtcggacccgaatctgcaaaac
atccccgtgcgcggtgaactgggccggcgcatgcggggctgcttcgtgcccgcgccgggg
cggcttctggtcagcgccgattattcgcagatcgaactgcgcgtgctggcccacctgtcc
caagacccgctgatgctccaggacatggccgaaggcctggacgtgcacacacagacggcc
gcgcgcatcttcgacgtcatgcccggcctggtcacccgcgagatgcgcgtccgggccaag
acggtcaacttcggcgtgctctacggcatgagcgcctttcgcctggcccgcgagcagggc
gtcagccgggccgaggccgaggatatcatcgcccgctatctggggcgttaccagggcgtg
gcccggttccagcagcaaaacctcagccagtgccgccagcggggctacgtcaccacgatc
ctgggccggcggcgttttttgccggccatcaactccagcgaccgccaggcccgcgaggcc
gccgaacgcgtggctctcaacacgcccatccagggttcggcggccgacatcatcaagctg
gccatgctgcgcgtcgacgagatgctcacgcgccattaccccgattcgccgatgatcctc
caggtgcacgacgagctggtcttcgagacgcccgagggcggcgtggagcaattcgcccag
gccgtgcgccgctgcatggaggacgtgctcaagctcgacgtcgagctgaaggtggatgtg
ggctggggccgcgactgggcccaggcccactga

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (4)   
   KEGG PATHWAY (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (21)   
   KEGG ORTHOLOGY (1)   
   RefGene (18)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (6)   
   Pfam (6)   
All databases (38)   

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