KEGG   Solidesulfovibrio carbinolicus: C3Y92_03855
Entry
C3Y92_03855       CDS       T06503                                 
Name
(GenBank) AP endonuclease
  KO
K01151  deoxyribonuclease IV [EC:3.1.21.2]
Organism
dcb  Solidesulfovibrio carbinolicus
Pathway
dcb03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:dcb00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    C3Y92_03855
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:dcb03400]
    C3Y92_03855
Enzymes [BR:dcb01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.21  Endodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.21.2  deoxyribonuclease IV
     C3Y92_03855
DNA repair and recombination proteins [BR:dcb03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    AP endonucleases
     C3Y92_03855
SSDB
Motif
Pfam: AP_endonuc_2
Other DBs
NCBI-ProteinID: QAZ66424
UniProt: A0A4P6HJ12
Position
complement(873071..873889)
AA seq 272 aa
MNTMLFGISGLPRGDGKRKFTYATAIPHLRGLGLDAMELPFVRSVNVTAKNQAAILAAKA
ENDFHLTAHASYFINLNAAEPDKLEASLARIRQGAEALALVGGRDLVFHPGYYLGQPPEV
VRQTIADNLRRLPDLGVSYRLETTGKATQFGTVAELAGLCRDIPTCKPCLDFSHIHARDN
GALKTRADFGRVLRQLADILGEAALAELHIHISGIEYGPKGEKRHLPLAQGDFDYTACLT
ALRDYGAAGCVICESPALEHDAMLLKKTWLAL
NT seq 819 nt   +upstreamnt  +downstreamnt
gtgaacaccatgcttttcggcatctccggcctgccccgtggcgacggcaaacgcaaattc
acctacgccacggccatcccccacttgcggggcctgggcctggacgccatggaactgccc
tttgtgcgctcggtcaacgtcacggccaagaatcaggcggccatcctggcggccaaggcg
gagaacgatttccacctcacggcccacgcctcgtatttcatcaatctcaacgccgccgag
ccggacaagctcgaagcctccctggcccgcatccgccagggagccgaagccctcgccctg
gtcggcggacgcgatctggtcttccaccccggctactacctgggccagccgcctgaggtg
gttcgccagaccatcgccgacaacctgcgccgcctgccggacctgggcgtgagctaccgc
ctggagaccacgggcaaggccacccagttcggcaccgtggccgaactggccggcctgtgc
cgcgacatccctacctgcaagccgtgcctggatttttcccacatccacgcccgggacaac
ggcgcactcaagacccgcgccgactttggccgggtgctgcgccaactggccgacatcctg
ggcgaggcggctttggccgagctgcatatccacataagcggcatcgaatacggccccaag
ggcgaaaagcgccatctgccgctggcccaaggcgacttcgattatacggcctgcctgacg
gcgctgcgggattacggcgcggccggctgcgtcatctgcgagtcgccggccctggagcac
gacgccatgctgctcaaaaagacctggctcgccctgtag

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (1)   
   Pfam (1)   
All databases (10)   

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