KEGG   Daucus carota (carrot): 108193434
Entry
108193434         CDS       T05350                                 
Name
(RefSeq) probable pectate lyase 18
  KO
K01728  pectate lyase [EC:4.2.2.2]
Organism
dcr  Daucus carota (carrot)
Pathway
dcr00040  Pentose and glucuronate interconversions
dcr01100  Metabolic pathways
Brite
KEGG Orthology (KO) [BR:dcr00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00040 Pentose and glucuronate interconversions
    108193434
Enzymes [BR:dcr01000]
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.2  Acting on polysaccharides
    4.2.2.2  pectate lyase
     108193434
SSDB
Motif
Pfam: Pectate_lyase_4 Beta_helix
Other DBs
NCBI-GeneID: 108193434
NCBI-ProteinID: XP_017215573
UniProt: A0A164UNB6
Position
7:complement(34001065..34003087)
AA seq 407 aa
MAMATNILSLLFLFSLLSTLSLISSSPHQDPELVVHEVHRNINASRRNLGFLSCGTGNPI
DDCWRCDPEWEKNRQRLADCSIGFGKNAIGGRDGKIYIVTDSGDDDAVTPKPGTLRHAVI
QDEPLWIIFQRDMVIRLKEELIMNSFKTIDGRGASVHIAGGPCITIQYVTNIIIHGINIH
DCKQGGNAMVRSSPRHFGWRTISDGDGVSIFGGSHVWVDHCSLSNCEDGLIDAIMGSTAI
TISNNFMTHHDKVMLLGHSDSYGQDKNMQVTIAFNHFGEGLVQRMPRCRHGYFHVVNNDY
THWEMYAIGGSASPTINSQGNRFLAPDRRFSKEVTKHEDAPESEWKNWNWRSEGDLMLNG
AFFTPSGAGGASSSYSRASSLGARPSTLVGQLTVAAGSLNCKKGSRC
NT seq 1224 nt   +upstreamnt  +downstreamnt
atggccatggcaactaacattctctctctcctctttctcttctctctcctctcaactctc
agtctcatctcttcttccccacaccaagaccctgagttagttgtccatgaagtacatagg
aatataaatgcttcgaggaggaacttgggatttttgtcatgcggaacggggaatcccatc
gacgactgctggcgatgcgatcccgagtgggaaaaaaatcgccagcgtctagcggactgt
tcaatcggatttgggaaaaatgctatcggaggccgagacgggaaaatttacatcgtcaca
gattctggggacgacgatgcagtgaccccgaagccggggacactgaggcatgcagtgatc
caagacgagccactatggattattttccagcgtgacatggtgatcagattaaaagaagaa
ttaattatgaattcttttaaaacaattgatggcaggggcgctagtgtacatattgctggt
ggtccatgcataacaattcaatacgtgacaaatataatcatccacgggattaatattcac
gattgtaagcaaggcggcaacgcgatggtccggagctcgccgcggcacttcgggtggagg
accatctcggacggtgacggtgtttcgattttcgggggcagtcatgtgtgggtcgatcat
tgttctttgtcgaattgcgaagacgggctaattgatgcgattatggggtccactgcgata
acgatatcgaataattttatgactcaccacgacaaggttatgttgctgggacatagtgat
tcttatggtcaggataagaatatgcaggttactattgcttttaatcacttcggtgaaggc
ctcgtccagagaatgcctagatgtagacatggctatttccatgtggtgaacaatgactac
acgcactgggaaatgtacgcgattggtgggagcgcgtcgccgacaattaacagccagggg
aacagatttcttgccccagaccgcagattcagcaaagaggtgacgaagcacgaggatgcg
ccagagagtgaatggaagaactggaattggcgatcagaaggtgatctgatgctaaatggt
gcgttttttacgccatcaggcgcaggaggagcttcgtcgagttactccagggcttccagc
ttaggcgcaaggccatcgactctagtaggtcagcttacagtggccgcgggttcacttaac
tgcaagaaggggtcgcgatgctga

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (2)   
   KEGG PATHWAY (2)   
Chemical substance (2)   
   KEGG COMPOUND (2)   
Chemical reaction (3)   
   KEGG ENZYME (1)   
   KEGG REACTION (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (2)   
   Pfam (2)   
All databases (19)   

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