KEGG   Daucus carota (carrot): 108193649
Entry
108193649         CDS       T05350                                 
Name
(RefSeq) uncharacterized protein LOC108193649
  KO
K14563  rRNA 2'-O-methyltransferase fibrillarin [EC:2.1.1.-]
Organism
dcr  Daucus carota (carrot)
Pathway
dcr03008  Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:dcr00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    108193649
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:dcr03009]
    108193649
Ribosome biogenesis [BR:dcr03009]
 Eukaryotic type
  Sno RNPs
   Box C/D snoRNPs
    108193649
SSDB
Motif
Pfam: Fibrillarin NOP5NT
Other DBs
NCBI-GeneID: 108193649
NCBI-ProteinID: XP_017215884
Position
7:complement(21721417..21728157)
AA seq 532 aa
MPIRFCWASRVSVNLNHRLSLGKSERIRGNMINGRPVKISKNNSRPSSVYSKFAPPELRY
LIFKGFNPPPLPSPPAPPSITVPRRPSYRKSQIIVPHDRFRGVYVSKDRTSLYTKNLVPN
LSNDGDVVVSVKDDDGTVNEYREWDPYRSKFAAAILCGAENIWIEPGCRVLVICSRDDEQ
FGITISHISDIVGPGGMVYVVDHKNGMTLADIAEKRFNIVPIICFNVPEHYRMLINMVDV
LFAAPNEPGETQVAYINALYFLKTGGHYVLFVQADCIESRSRGDAVFSSMIRPKEFEFKR
KQRVTLEPFDRDHAYLFGDFRTIEMVDPSCLVALKFWTAPRLYRGDREHVTIYEQLWDLP
VYLLFESSCGYALLQAHDMLKVERNYLAIEEYISRFDDFFELIAYQPFKSTDEALVHLNA
NCKGIVYKQMLDFLVFNLPTPMEGGKHCYSLALVSGGISEDIINKTKIACQANLFHVDIL
RGVRMHIDKVINDIKPGDLEKAQLDLARSYCRQKLISPDEKKPKKEKRQISG
NT seq 1599 nt   +upstreamnt  +downstreamnt
atgccgattaggttttgttgggctagccgcgtatctgtaaatctcaaccatcggctttcg
ttggggaaaagtgaaagaatacgtggcaatatgataaacggcaggccagtaaaaatctct
aaaaataattctcgcccttcttctgtttactcaaagttcgctcccccggaacttcgatat
cttatttttaaaggtttcaatccacctcctttaccatcaccaccagcaccaccatcaatc
acggtgccacgtagaccctcatatcgtaaatctcaaatcatagtgcctcatgatagattt
cgaggtgtttatgttagcaaggataggacgagcttgtataccaaaaatttggtcccaaat
ctctccaacgacggtgatgtcgtggtttctgttaaggatgatgatgggactgtaaatgag
tatagagaatgggatccgtataggtcaaagtttgctgctgctattctttgtggtgctgaa
aatatatggatcgaacctggttgccgagtattagtgatttgctcgcgagatgatgaacaa
tttgggatcacgatttcacatatctctgatattgttggacctggaggtatggtttatgta
gtggaccacaaaaatgggatgactcttgcagacatcgctgaaaaacgcttcaatattgta
cctattatatgtttcaatgttccagaacattatcgcatgcttattaatatggtagatgtg
ctgttcgctgctccaaatgaacctggagagacccaggttgcatatataaatgccctgtac
ttccttaaaactggtggacattacgtgctctttgtccaggctgattgtattgaatcaaga
agccgtggtgatgctgtgttcagttctatgatcagacctaaagagtttgagttcaagcga
aagcagcgagtcactctggaaccatttgacagagaccatgcctatctttttggtgatttt
cgcaccattgagatggttgaccctagctgtttagtggctcttaagttttggactgcaccg
aggttatataggggtgatagggagcatgttactatttatgaacaactttgggacttgcca
gtttatctgttgtttgaatcctcctgtggatatgctctcttgcaagctcatgacatgttg
aaggttgagagaaattatctagccattgaggagtatatcagtcgctttgatgatttcttt
gagcttatagcttatcaaccttttaaatctactgatgaagctctagttcaccttaatgct
aattgcaaagggattgtgtacaagcaaatgctagactttctggtgtttaatcttccaaca
ccgatggagggtggtaaacactgttattcactggcacttgttagtggaggcatatcagag
gatataataaacaaaaccaaaattgcttgccaggcaaatttgtttcatgttgatatactt
cgtggtgtgcggatgcatattgacaaagtcatcaacgatattaagccaggagacttggaa
aaagcgcaattagatctcgctcgaagttactgcaggcaaaagcttatatcaccagatgaa
aaaaagccaaaaaaagaaaagagacagatctcaggctag

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (2)   
   Pfam (2)   
All databases (12)   

Download RDF
DBGET integrated database retrieval system