KEGG   Daucus carota (carrot): 108197050
Entry
108197050         CDS       T05350                                 
Name
(RefSeq) U3 small nucleolar RNA-associated protein 6 homolog
  KO
K14557  U3 small nucleolar RNA-associated protein 6
Organism
dcr  Daucus carota (carrot)
Pathway
dcr03008  Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:dcr00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    108197050
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:dcr03009]
    108197050
Ribosome biogenesis [BR:dcr03009]
 Eukaryotic type
  90S particles
   U3 small nucleolar RNA-associated proteins
    108197050
SSDB
Motif
Pfam: U3_assoc_6 TPR_14 TPR-S TPR_1
Other DBs
NCBI-GeneID: 108197050
NCBI-ProteinID: XP_017220017
Position
8:13556671..13560829
AA seq 653 aa
MADVVQYKLERMVRELDDLERRNLFTKSEISEIVKQRRKFEYRLKRPSPLKQDYLNYIEY
EKNLDKLRFLRRKAVSRELKKNGNQRMKKSVSDYSGVSRIIEIYKLVTNRFKGDLEIWFQ
FLEFCRIKKNGHLKKALAQVVRFHPKVPGVWIYAAAWEFDTNLNVAAARALMHAGLRACP
TSVDLWVEYIRMELTYLNKLKARKVALGEDEGTLSREHLDPADEQWRDENKELFMALNDH
KEKDEASNITNGEVEKKSDLFGEQGLSILQTVYSNAVKALPSDFSLRTRMLEILEATELA
HSEEMKKKILNDMKRDFLKESEYWDWLARSEAGQLLKTHGMSEDISLHKLEKAIQIYEEA
VEIVPSHMMFIHYTKFLVDAIGQQNGKMRSFTLANGVDSISHILMVYEKAERMGCLTEDL
ACQYVSFLMELGKSDEARKLAVRLCSGKFLDAVHLWNLRLSMEIRCITEKSPSLSKTDLS
VVFELFKSILMRISVSKAQSLWLMALKFFANQRRYFDKLVEISLGLLAKYGGSDDGFCLS
SSIVNICLQKDGIQSAREIYKRYLALPHPGLALYRSCIELEQNLASASSKPSLVEVQRLF
ETALATYDQDVSLWQDYHNMETKMGTSEAAAAVHWRARKTLKDNAALLTSQSL
NT seq 1962 nt   +upstreamnt  +downstreamnt
atggcggacgtagtccaatacaagctagagcgcatggtccgagagctcgacgacctcgag
cgccgcaacctcttcaccaagtccgaaatctccgagatcgtcaaacagcgccgcaagttc
gagtacagactcaagcgccccagcccactcaaacaagactacctgaattacattgagtat
gagaagaatttggataagcttaggttcttacgacgcaaggcggtgtcgagagagctcaag
aaaaatggcaatcagaggatgaagaaatcggtttctgactattcgggggtatcgagaatt
atcgagatttataagctggttacgaataggtttaagggtgatttggagatttggtttcag
tttctcgagttttgtaggataaaaaagaatgggcatttgaaaaaggcccttgctcaggta
gttaggtttcatcccaaagtaccaggggtttggatatatgctgctgcttgggaatttgac
accaacttgaatgtagcagctgctcgtgctctaatgcatgctggattaagagcgtgccca
acttcagttgatctatgggtagagtatattcgtatggagctgacttatcttaataagttg
aaagctcgaaaagttgctcttggggaagacgagggaacactgtctcgagagcatcttgat
cctgcagatgagcagtggcgagatgaaaataaagagttgtttatggctcttaatgaccat
aaggaaaaggatgaggcatcaaatattacaaatggcgaggttgagaaaaaatctgatctg
tttggggagcaaggtctgagcattcttcaaaccgtttacagcaatgcagtgaaagccctc
ccttcagattttagtttgagaactcgaatgttggagatacttgaagcgacagagttagca
cattcagaagaaatgaagaagaagatacttaatgacatgaaaagagattttttgaaagaa
tccgagtattgggactggcttgcgagaagtgaagcaggtcaacttctaaaaacccatgga
atgagtgaagatattagcttacataagttggagaaagcaattcagatttatgaggaagct
gtagaaattgtgccttcgcatatgatgtttatacattatacaaaatttttggttgatgcg
attggtcaacaaaatggaaaaatgcgtagctttactttggctaatggtgtagattccatc
tcacacatcttaatggtatatgaaaaagctgagaggatgggttgtcttacggaagatctt
gcttgccagtatgtatcttttttaatggaactgggaaaatctgatgaagctaggaaactg
gcagtaaggctctgcagtggaaaattcttggatgcagtgcatttatggaatttgcggcta
tcaatggaaattagatgcataacagaaaagtctccatctctgagcaaaactgatctttca
gttgtcttcgaactcttcaaaagtattctaatgagaatatcagtttcaaaagctcagagc
ttgtggcttatggctctcaaattctttgcaaatcaaagacgttattttgacaagctggtg
gagatatcccttggtttattggctaaatatggtggtagcgatgatggcttttgcctttct
tcttcaattgttaatatatgtcttcaaaaagatggaattcagagtgccagagagatctat
aagcgatatcttgctttacctcatccaggtcttgcattatatcgaagttgcatagagctg
gaacagaaccttgcatctgcaagtagtaaacccagtctggtagaagtccagaggttattt
gagaccgcactagcaacctatgatcaagatgtgagcttgtggcaagattatcataatatg
gagactaaaatggggacttcagaagctgctgctgctgtccattggcgtgcaaggaagaca
ctcaaagataatgctgcactactaacttctcaaagtttgtga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (4)   
   Pfam (4)   
All databases (14)   

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