KEGG   Daucus carota (carrot): 108199468
Entry
108199468         CDS       T05350                                 
Name
(RefSeq) ribosome biogenesis protein BMS1 homolog isoform X1
  KO
K14569  ribosome biogenesis protein BMS1
Organism
dcr  Daucus carota (carrot)
Pathway
dcr03008  Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:dcr00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    108199468
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:dcr03009]
    108199468
Ribosome biogenesis [BR:dcr03009]
 Eukaryotic type
  90S particles
   GTPase
    108199468
SSDB
Motif
Pfam: RIBIOP_C AARP2CN GTP_EFTU MMR_HSR1 AAA_22 AAA AAA_16 RNA_helicase Tenui_NS3
Other DBs
NCBI-GeneID: 108199468
NCBI-ProteinID: XP_017222777
Position
8:24811991..24825449
AA seq 1194 aa
MAIDGGIFNPSQKSHRTRQSGPSAKKNKKKKSDNKNNVPNDKTHNPKAFAFTSTVKAKRL
QSRATEKEQRRLHLPTVNRNIGEEPPFVVVVQGPPQVGKSLVIKSLVKHYTKHNLPEVRG
PITIVTGKQRRVQFVECPNDINGMIDAAKFADLALLLIDGSYGFEMETFEFLNIMQNHGF
PKVMGVLTHLDKFKDVKKLRKTKQRLKHRFWTEIYDGAKLFYLSGLIHGKYPKREVHNLA
RFVSVMKFHPLSWRKDHPYVLVDRFEDVTPPEKVELDKKCDRNVTLYGYLRGCNLKKETK
VHIAGVGDFSVAGITSLADPCPLPSAAKKKGLRDKEKLFYAPMSGLGDLLYDKDAVYINI
NDHFVQFSKVDGESGGVTEKGKERDIGEKLVESLQNTKYSIDEKLEKSFINLFSKKPSSS
VLEEPSDTKDNQYQSGEESDTDESGEEDEDDDLKCVKYSDEGRTLQKDSTSKTVDSGSDE
DINAIEESVSGNKVSEHVEFRNGRMRRRAVFGNELDLDNSEDSDESVEDGDEDMDTKVSS
LSEEDEKDLTDDEDKMGNASRWKDSLKERIHLGQNKNLRQLIYGRRESKLTSSTDDVQGS
SEDEESDEGEFFKPKGEGIKSVREDFDGDNVNNDDCSKFLNHADVKNWIEEEKYESIRDR
FVTGDWSKAGRSGQDSDANSDEENTGMGDFEDLETGEKHESRVNGEDLDAEQRRLKKLAL
RAKFDSQYDGSDSAEEENDTKTKAKHHHNQGQDGGFYDKAKEEAELIRQMKIAELNDIDE
ATLVEMEGYRTGTYVRLEIHDVPCEMVEYFDPCHPILLGGIGLGEEGVGYMQVLLKRHRW
HKKVLKTRDPIIASIGWRRYQTTPIYAIEDQNGRHRMLKYTPEHMHCLAMFWGPLAPPKT
GVVAVQNLANRQASFRITATGQVKESNHAARIVKKIKLVGYPCKIFKKTALIKDMFTSDL
EIARFEGAAIRTVSGIRGQVKKAAKEEIGNQSKKKGGISKEGIARCTFEDKILMSDIVFL
RAWTQVEVPCFYNPLTTALQRRDQPWEGMKTVAELRRDQNLPVPVNKDSLYKPIERKVRK
FNPLVIPKSLQAALPFASKPKNIPSRRRPLLENRRAVVMEPHERKVHALVQHLQLIRNDK
MKKRKLKEDVKRKLHEAEKAKEDLITKKRQRDERREKYRQEDKVKKKMRRNSDD
NT seq 3585 nt   +upstreamnt  +downstreamnt
atggctatagatggaggcatattcaatccatcacaaaagtcacacaggactcgtcaatct
ggcccctccgccaagaaaaacaaaaaaaagaagagcgataacaaaaacaacgttcctaac
gataaaactcataaccctaaggcgtttgcgttcacgtcaactgtcaaagctaagagatta
cagtctcgtgctacagagaaagagcagcgcaggcttcatcttcctactgttaatcgcaac
attggcgaagaacctccttttgtagttgtcgttcaaggccctccccaggtaggaaagtcg
ctggtcataaaatctttggtgaagcactataccaagcataacttgccggaagttagaggt
cccataactattgtgacaggtaagcaacggcgggtgcaatttgttgaatgtccaaatgac
atcaatggaatgattgatgctgcgaagtttgctgatttagcattgcttctgatcgatgga
agttacggatttgaaatggaaactttcgagttccttaatattatgcaaaatcatggattt
cctaaagttatgggagttcttacgcaccttgataagtttaaggatgtaaagaaactcaga
aagactaaacagagacttaagcaccgtttctggactgaaatatacgatggagcgaagcta
ttctatctatctggtctaattcacgggaagtatccaaaacgggaagttcataatcttgca
agattcgtttctgttatgaagttccatcctttatcgtggcgtaaggatcatccctatgtt
ttggtagatcgatttgaagatgtcacacctccagaaaaagtggaacttgataagaagtgc
gacagaaatgtcaccttgtatggttacctgcgtggctgtaatttgaaaaaagaaactaag
gtacatattgctggggtgggtgatttcagtgtagctggtattactagcttagctgatcct
tgccctttgccctcagctgcaaagaagaagggtttgcgtgacaaggaaaagctattctat
gcacctatgtctggtttaggggatcttctttatgataaggatgctgtatacataaacatc
aatgatcatttcgtccagttctctaaagttgatggtgaaagcggcggagtgacagaaaaa
ggaaaggaacgagatataggtgagaaattggtggaatcattacaaaacacaaaatattct
attgatgaaaaattggagaaaagctttatcaacctttttagcaaaaaacccagtagtagt
gtactggaagagccaagtgacacaaaggataaccaatatcagtcaggagaagaatctgat
actgatgagtcgggtgaagaagatgaggatgacgacttgaaatgtgtgaaatattcggat
gaaggtagaacccttcaaaaggattctacatcaaaaactgtagatagtggttctgatgaa
gatatcaatgcaatagaggagtccgtatcgggaaataaagtgagtgagcatgtcgagttc
cgtaatggaagaatgaggagaagggctgtttttggaaatgaattggatcttgataattct
gaggactccgatgaatctgttgaagatggagatgaggatatggacactaaagtatcctcc
ctctcagaggaagacgaaaaggatctcacagatgatgaagataagatggggaatgcttca
agatggaaagattctctgaaagagaggatccatttgggacaaaataaaaatcttaggcaa
cttatatatggcaggcgtgaatcgaagttaacttcttcaactgatgacgtgcaaggtagc
agtgaggatgaagagagtgatgaaggcgaattttttaagccaaaaggagagggtataaag
agtgttagggaagattttgatggtgataatgtgaataatgacgattgttccaaattttta
aaccatgctgatgtaaaaaactggatagaggaagaaaaatatgaaagtatccgtgaccgt
tttgttaccggagattggtcaaaagctggtcgaagcgggcaagactctgatgcaaatagc
gatgaggaaaatactggcatgggtgattttgaagatttggaaactggtgaaaaacatgag
agtcgtgtaaatggtgaagatcttgatgctgaacaacgccggttaaaaaagctcgcactt
cgtgcaaaatttgattcccaatatgatgggtctgattctgccgaggaggaaaatgatact
aagactaaagccaagcatcatcataaccaaggccaagatggtggattttatgacaaggca
aaggaggaagctgaacttattagacagatgaaaattgctgaactaaatgatattgacgag
gcaactcttgtggagatggagggttatagaacagggacatatgttagattggaaattcat
gatgttccttgtgagatggttgaatattttgatccgtgtcatcctattcttctaggaggt
attgggcttggagaggaaggcgttggatacatgcaggtactgttgaagcggcacaggtgg
cacaagaaagtactaaagactagagaccctataattgcttcaatagggtggaggcgctac
caaactacacctatatatgccattgaggaccaaaacgggcgccatcggatgcttaagtat
acacctgagcacatgcactgtcttgctatgttttggggccctcttgcaccaccaaagacg
ggggttgttgcagttcaaaatttagctaacagacaggcttcgtttaggatcactgctact
ggacaagtgaaagagtctaatcatgctgcgcgaatagtgaagaagataaagttagttggt
tatccgtgcaagatctttaagaaaactgcacttatcaaagacatgttcacttcagatctt
gaaatagctaggtttgaaggtgcagctatcagaactgttagtggaatacgtgggcaagtg
aagaaggctgcaaaagaagaaattggtaaccaatctaagaaaaagggaggaatttctaaa
gaaggaattgctaggtgcacctttgaggataaaattttgatgagtgacattgtttttttg
cgtgcttggactcaagttgaagtcccttgcttttacaatcctttgacaacggctttgcaa
cgtcgtgaccagccatgggaaggaatgaaaacagtagctgaactgaggagagatcaaaat
ctcccagttcctgtcaacaaagactcactttacaagccaattgaaaggaaggttaggaag
ttcaacccactggttattcccaagtcgttacaggcagctctcccttttgcctccaagcca
aaaaatattccaagtcgaaggcgaccactacttgagaatcgtagagctgtcgtcatggag
cctcatgagaggaaagttcatgcacttgttcaacatctgcagttgatcagaaatgataag
atgaaaaagaggaagctcaaggaagatgtaaagagaaagttgcatgaagcagaaaaagca
aaggaagacctgattaccaaaaagcggcagagagatgaaagacgagaaaaatatcgtcaa
gaggacaaggtaaagaagaaaatgagaagaaattcagatgactaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (9)   
   Pfam (9)   
All databases (21)   

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