KEGG   Daucus carota (carrot): 108200412
Entry
108200412         CDS       T05350                                 
Name
(RefSeq) RNA polymerase II-associated protein 3 isoform X1
  KO
K23002  RNA polymerase II-associated protein 3
Organism
dcr  Daucus carota (carrot)
Brite
KEGG Orthology (KO) [BR:dcr00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:dcr03021]
    108200412
Transcription machinery [BR:dcr03021]
 Eukaryotic type
  RNA polymerase II system
   Other transcription-related factors
    Others
     108200412
SSDB
Motif
Pfam: RPAP3_C TPR_1 TPR_2 TPR_12 TPR_8 TPR_10 TPR_9 TPR_11 TPR_17 TPR_16 Peptidase_S26 FAM153 MIT
Other DBs
NCBI-GeneID: 108200412
NCBI-ProteinID: XP_017224033
Position
9:5269248..5276987
AA seq 427 aa
MAKVPPKHARDQNQDFQGFLNNLQDWESSLKDKEKKLKSQSLSKEKTKIGIVGEDRKQRG
KPASNNSSTAQFDYLRSFNAMDNLSSAVMTEGSAVDANSEKELGNENFKQKKYQEAIDCY
SRSIAFLPTAVAYANRAMAYLKLRRFQEAEDDCTEALNLDDRYIKAYSRRSTARKELHKL
KESVEDAEFALRLEPHNQEIKRQHTESKALYEKEILKKAAASLKSAEKGVQRVAKPVIEM
SSQNNGVQTVSSGSENMGVAAMNVDSKKRNHKTGQEELKASVQELAARAAALATAEAAKN
ITPPTSAYQFEVSWRGFSGDRSLQARLLKVTSPVALPRIFKNSLSAPILIDIVRCIATIF
NEEPAMSVKYLESLTKVSRFDIIIMCLPSTDKADLVKMWDHVFLKDGTSAEYAGVLRNLR
PKYCPYQ
NT seq 1284 nt   +upstreamnt  +downstreamnt
atggccaaagttccacccaagcacgcccgtgatcaaaaccaggatttccaggggttctta
aataatttgcaggattgggaatcgtcactcaaagacaaggagaagaaattgaagtcccaa
tctttaagcaaggaaaaaacgaagattggaatagttggcgaagatagaaaacaaagggga
aaaccagcatcaaataacagttcgactgctcagtttgattacttgagaagttttaatgca
atggacaacttatcaagtgctgtgatgacagaagggagtgctgtcgatgctaattcagaa
aaagagttgggtaatgagaatttcaagcagaagaaatatcaagaggcaatcgactgctat
tctaggagcattgcattcttgcctactgcagtagcttatgcaaacagagcaatggcttat
ctaaaactcaggagattccaggaggctgaagatgactgtaccgaagctttaaatttagat
gatagatatattaaagcttactcacgcagatcaaccgccagaaaagaacttcataaactt
aaggaatcagttgaagatgctgagtttgccttaaggttggagcctcacaatcaagagatc
aaaaggcagcatactgaatctaaggctttgtatgagaaggagatccttaaaaaagcagct
gcgtcattgaaaagcgcagagaagggagtccaaagggtagcgaagcctgtgatagaaatg
agttctcagaacaatggcgtccaaactgtttcaagtggttctgaaaacatgggtgtggct
gcaatgaatgtagatagtaaaaagagaaatcacaaaactggccaggaagagctgaaggct
tcagttcaagagcttgctgctcgtgctgctgcacttgcaacagctgaagctgccaaaaac
ataacccctccaacttctgcttatcagtttgaggtttcctggcgaggattctctggtgat
cgtagtttacaggcacgattattgaaggtaacctctccagtcgcgttacctcggatattt
aagaattcattatcagctccaatattgattgacatagtcaggtgcattgccacaatattt
aatgaagaacctgctatgtcagtcaaatatctagaaagtctaaccaaggtctcaaggttt
gacattatcatcatgtgccttccttcaacagataaagcggatctcgtgaagatgtgggac
cacgtatttttaaaggatgggacttcagcagagtatgcaggggtgctaagaaatcttcga
cctaaatactgcccctatcagtga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (8)   
   RefSeq(pep) (8)   
DNA sequence (8)   
   RefSeq(nuc) (8)   
Protein domain (13)   
   Pfam (13)   
All databases (36)   

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