KEGG   Daucus carota (carrot): 108202651
Entry
108202651         CDS       T05350                                 
Name
(RefSeq) cell division control protein 48 homolog C-like
  KO
K14571  ribosome biogenesis ATPase
Organism
dcr  Daucus carota (carrot)
Pathway
dcr03008  Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:dcr00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    108202651
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:dcr03009]
    108202651
Ribosome biogenesis [BR:dcr03009]
 Eukaryotic type
  Pre-60S particles
   Other pre-60S particles
    108202651
SSDB
Motif
Pfam: AAA AAA_lid_3 RuvB_N AAA_5 AAA_16 RNA_helicase AAA_14 TIP49 AAA_22 AAA_2 AAA_18 nSTAND3 AAA_17 AAA_28 AAA_33 Zeta_toxin AAA_11 IstB_IS21 Viral_helicase1 AAA_3 Rad17 Mg_chelatase NACHT Bac_DnaA ATPase_2 Parvo_NS1 Cytidylate_kin2 Nucleolin_bd TsaE NB-ARC AAA_19 ATPase AAA_7 Vps4_C CPT DUF4972
Other DBs
NCBI-GeneID: 108202651
NCBI-ProteinID: XP_017226635
Position
9:complement(4405964..4411908)
AA seq 824 aa
MKSFSKRRSGGGGSNGGFERILRGHVENSYNNNITTVHEIVDHLRASFPQYSRQKLQPFT
RNVDRSLSNILAERRNSIFDEEDALEGSPAKKRLRSVDKREERLREIEKNHVIRQRARNS
VSDVTEDEEESESTSTSSDNIYSEKFEPEIDLMKSMLRNSYSGSKKGENSVKLKQANPVR
LEDKNVELDIMNEKISKKLDFGGGEGSVRGVKLQKKKCGGSGEDEVKRKDGPMFKDLGGM
DKVVEELKMEVIVPLYHPQVAHCLGVTPVRGILLHGPPGCGKTKLAHAIANEMRFPFYKI
SSTELVSGVSGASEENIRELFSKAYRTAPSIVFIDEIDAIASKRESLQREMERRIVTQLM
ACMDEPPRIASQNEKDGSSENSDSRPGQVLVIGATNRPDAVDAALRRPGRFDREILLGVP
DESARVEILSVLTSKLKVEGDFDLLKLARCTPGFVGADLAALANKAGNLAMKRIIDQRKS
ELSIEPLNKENAEEWWRRPWSPEEMEQLCITMDDFEEAAKMVQPSSRREGFNSIPNVKWE
DVGGLDSLRKEFEKYIVNRIKYPEDYEEMGLQQEMGFLLYGPPGCGKTLIAKAVANEAGA
NFIHIKGPELLNKYVGESELAVRTIFSRARTCSPCILFFDEVDALTTMRGKEGGWVVERL
VNQLLLELDGAEQRRGVYVIGATNRPEVMDRAILRPGRLGKLLYVPLPSPDERGLILKAL
AKKKPIDATVDLVAFGKNDSCSYLSGADLAALMDEAAMAAIEDKRQEQKSSNGTRCTIKT
EHFDRALKKVPPSVSVKQNDYYERLKQSFSPACQPEASGTTSFV
NT seq 2475 nt   +upstreamnt  +downstreamnt
atgaaaagcttctcaaaacggcgttccggaggcggcggaagcaacggtggcttcgagcga
atcctacgcggccacgtggaaaattcgtacaacaacaacatcaccaccgtccacgagatc
gtcgatcatctccgcgcctcttttcctcagtacagtcgccaaaagctccagccttttact
cgcaacgtcgatcgctctctctcgaacattctcgccgagaggagaaactcgatttttgat
gaggaagacgcgctggaggggtctccggcgaagaagaggctgaggagtgttgataagagg
gaggagagattgagagagattgaaaagaatcatgtgattaggcagagggcgagaaattcg
gtttcggatgtgacggaggatgaggaggagagtgagtcgacgtcgacgagttcggataat
atttatagtgagaagtttgagccagagattgatttgatgaaatcgatgcttcggaatagt
tatagcgggagtaaaaaaggcgagaattcggtgaaattgaagcaggcgaatccggttagg
ttagaggataagaatgtggaattggacattatgaatgagaaaattagtaagaagctcgat
tttgggggaggagagggaagtgttagaggtgtgaagttacagaagaagaaatgtggaggg
agtggtgaggatgaggtgaagaggaaagacggaccgatgtttaaggatttaggagggatg
gataaagtggtggaggaattgaagatggaggtgattgttccgttgtatcatccgcaagtg
gctcattgtttaggagtgacaccggtgagggggattttattacacggcccacctgggtgc
gggaagactaagcttgcgcatgctattgctaatgagatgaggtttcctttttataagatt
tcctcgacggagttggtgtctggtgtgtcaggtgcatcagaagagaacatccgggagctg
ttctcaaaagcttacaggactgcaccatccattgtttttattgatgagattgatgcgatt
gcttctaagagggaaagtctacagagggaaatggaacgccgtattgtgacacaactgatg
gcatgcatggatgaaccacctagaattgcatcacaaaacgagaaagatggcagttcagaa
aattctgattccagacctggtcaagttttggtaatcggcgcgaccaataggcctgatgct
gtagatgctgcattaaggaggccagggcgatttgatcgtgagattctgttaggtgttcca
gatgaaagtgcgagggttgagatcctttcagtgcttacaagtaaactaaaagtcgaaggt
gattttgatctcttgaaattagctaggtgcactccagggtttgtcggagctgatctggct
gcattagctaataaagctggaaatcttgccatgaagagaatcatagaccaaaggaagtct
gagttgtctatagaacctttaaataaagaaaatgctgaagagtggtggaggcgtccatgg
tcccctgaagagatggagcagctttgcattactatggatgattttgaggaagcagctaag
atggttcaaccctcttcaagacgtgaaggttttaacagtattccgaatgtaaaatgggaa
gatgttggagggcttgattcactgaggaaggagtttgaaaaatatatagttaatcgaata
aaatatccagaagattatgaggaaatggggttgcagcaggagatgggatttttattatat
gggcctccaggttgtggtaagactttaatagcgaaggctgttgctaatgaagcaggagcg
aatttcatacacataaagggccctgaactgttgaataagtatgttggtgaaagtgagttg
gctgtccgaacaatatttagtcgtgcaaggacctgttctccatgcatactcttctttgac
gaggtggatgctttgacaacgatgcgaggaaaagaaggcggatgggttgtagagcgtctt
gtgaaccagttattgttagaactagatggtgcagagcagcgacgtggtgtttatgtaatt
ggtgccacaaataggccagaggtaatggatcgtgctatcttgcgacctggaagattggga
aaacttctgtatgttcctctgccaagtccagatgagagaggattaatattaaaagcactt
gctaagaagaaacccattgatgccacagttgacttggttgccttcgggaagaatgattct
tgcagttacttaagtggagctgaccttgctgcattaatggatgaagctgcaatggctgca
attgaagacaaacggcaggagcaaaaaagttcaaatggcactcgatgtaccataaaaaca
gagcattttgaccgagcactgaaaaaagttccgccatctgtctcagtcaagcaaaacgat
tattatgagcgtttaaaacaaagctttagtccagcatgtcagcctgaagcttctgggact
acaagttttgtataa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (36)   
   Pfam (36)   
All databases (46)   

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