KEGG   Daucus carota (carrot): 108203448
Entry
108203448         CDS       T05350                                 
Name
(RefSeq) rhamnogalacturonate lyase-like isoform X1
  KO
K18195  rhamnogalacturonan endolyase [EC:4.2.2.23]
Organism
dcr  Daucus carota (carrot)
Brite
KEGG Orthology (KO) [BR:dcr00001]
 09190 Not Included in Pathway or Brite
  09191 Unclassified: metabolism
   99980 Enzymes with EC numbers
    108203448
Enzymes [BR:dcr01000]
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.2  Acting on polysaccharides
    4.2.2.23  rhamnogalacturonan endolyase
     108203448
SSDB
Motif
Pfam: Rhamnogal_lyase CBM-like fn3_3 CarboxypepD_reg Hid1
Other DBs
NCBI-GeneID: 108203448
NCBI-ProteinID: XP_017227874
Position
1:38886250..38892756
AA seq 687 aa
MFAFEMGKLGKSQRRRGYYFVGFLGFMFQLFLLTESTVRRQNITSSNSRPVHLDILDDQV
VVDNGLAKFTFSKPAGMITGINYNGIKNILEQRNKETNRGYWDVVWSKPEDPGDIYDVLQ
GTHFRVVVANEDQVELSFTKTWIPPVKGTKRPRDDNSLPLNIDKRYIVLRGVPGFYSYAT
FERLEGWRDMVLYEGRIAFKLQEKLFRYMAVSDDRQRVMPTFEDRERGKALAYKEAVLVT
DSIKDTHSVEVDDKYQYSAENRENKVHGWICSNPATGFWMITPSSEFRVGGPLKQDLTSH
AGPVTLSMFFSAHYAGKPLALTFKEGEPWKKVFGPVFIYLNSGLDTESTVSLWQDAKEQM
LIETESWPYDFPRSGDYFLANKRGTLSGRLLVRDRYTRIELKTAKFANVGLALPGAAGSW
QTENKGYQFWTQADAMGYFVIKNVLPGTYNLYAWVPGLIGDYKYAYNIIIKPGGIVKLGN
IVYVPPRNGPTLWEIGIPDRTAAEFFVPQPITTLENTLYEEDTAEGFRQYGLWDRYTDLY
PNEDLVYAIGVHRYQRDWFFAHVNRRLEDNTYVPTTWKVLFNLKQVDRTRTYTLQLALAS
ANGAELQVRINDEAAKHPHFTTHLIGYDNAIARHGIHGLYRLYSVNFLGNLLQPGKNIIF
LKQTRGKSPFNGVMYDYIRLEQPPPTN
NT seq 2064 nt   +upstreamnt  +downstreamnt
atgtttgctttcgaaatgggcaagctggggaagagccaaaggcgacgaggatattatttt
gtggggtttcttggattcatgtttcagctattcttgctgactgaatctaccgttcgtcga
caaaatataacatcgagcaactcgcggccagtgcatctggatatattggatgatcaagtt
gtagtggacaatggattggctaaattcactttctcaaagccagctggtatgattactgga
ataaattacaacgggattaagaatatactagaacaaaggaacaaagaaactaacagaggg
tattgggatgttgtttggagcaagccagaagatcccggagatatttatgatgtgttacaa
gggacacattttagagtcgttgttgcaaatgaagatcaagtagagctgtcgtttacaaaa
acatggattcctccggttaagggcactaaacgtcctcgtgatgacaatagccttccactc
aatatagacaaaaggtatatagtgctccgaggagtcccaggtttctactcatatgccaca
tttgaacgcttggaaggatggcgcgatatggtgctatatgaaggcaggattgcattcaag
cttcaagaaaaattgtttcgatacatggcagtgtcagatgaccgacaaagagtcatgcca
acatttgaagaccgggaaagggggaaggcccttgcttataaagaagccgtgctagtgaca
gattcgattaaggacacacatagtgtagaggtggatgacaaatatcaatattccgctgaa
aacagggaaaataaggtgcacggatggatatgctccaaccctgccaccgggttctggatg
atcacacccagcagtgagtttcgtgttgggggacctcttaagcaggacctcacttctcat
gccggaccagtaactctgtcaatgttcttcagtgctcattatgctggaaagcccctagca
cttacgtttaaagaaggggaaccctggaaaaaggtttttggcccagtttttatctattta
aactcaggcttggacacggaaagtactgtttcattgtggcaagatgctaaagaacagatg
ttgatagaaactgagagctggccatatgatttcccgcgctctggtgattattttcttgca
aataagcgtggcacacttagtggaaggttactggtacgagacaggtatacaagaatagag
ttgaaaacagctaagtttgcgaatgtgggactggctctacctggagcagcaggctcctgg
caaacagaaaacaagggttatcaattttggacacaagctgatgcaatggggtattttgtg
ataaaaaatgtcttgcccggaacatataacttgtatgcttgggtgcctggacttatcggt
gattacaaatatgcatacaatattatcatcaaaccaggaggcattgtaaaattaggtaat
attgtatatgttcctccaagaaatggccctacactatgggaaattggcatccctgatcgc
acagcagctgagttttttgttcctcaacctatcacgactcttgaaaacacattatatgag
gaggatactgcagaggggtttaggcagtacggattatgggatcgttacactgatctatat
cctaatgaagatctagtttacgctattggtgttcataggtatcaaagggactggttcttt
gctcatgttaataggagacttgaagataacacctatgtaccaacaacatggaaagtttta
tttaatttaaaacaagtggatcggaccagaacttacacattgcagctggcacttgcttct
gccaatggagctgaattacaagtccggatcaacgatgaagccgccaaacatcctcacttt
acgacacatcttataggctatgataatgcaattgcaagacatgggatccatggactatac
cgcttatacagtgttaattttttgggaaatcttttacaaccggggaaaaatataatattt
cttaagcagacaagaggaaaaagtcctttcaatggagtcatgtatgattatatacgtttg
gaacagccaccgccaacaaattaa

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Ontology (2)   
   KEGG BRITE (2)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (5)   
   Pfam (5)   
All databases (17)   

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