KEGG   Daucus carota (carrot): 108218612
Entry
108218612         CDS       T05350                                 
Name
(RefSeq) probable ubiquitin-like-specific protease 2B isoform X1
  KO
K08596  sentrin-specific protease 7 [EC:3.4.22.68]
Organism
dcr  Daucus carota (carrot)
Brite
KEGG Orthology (KO) [BR:dcr00001]
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01002 Peptidases and inhibitors [BR:dcr01002]
    108218612
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:dcr04121]
    108218612
Enzymes [BR:dcr01000]
 3. Hydrolases
  3.4  Acting on peptide bonds (peptidases)
   3.4.22  Cysteine endopeptidases
    3.4.22.68  Ulp1 peptidase
     108218612
Peptidases and inhibitors [BR:dcr01002]
 Cysteine peptidases
  Family C48: Ulp1 endopeptidase family
   108218612
Ubiquitin system [BR:dcr04121]
 Deubiquitinating enzyme (DUB)
  UBL-specific proteases (ULPs)
   108218612
SSDB
Motif
Pfam: Peptidase_C48
Other DBs
NCBI-GeneID: 108218612
NCBI-ProteinID: XP_017247119
Position
4:34776905..34788790
AA seq 1008 aa
MTKSSLGVFDFDEEDNAAELIAAKYSGKIMDSEAHQNCAEGKSMQFKDRGNVARVDVDGT
NIDNNSECAASSAFMNGEDCDVNMSDFDAMPLTVSCFAEELPQSRPIKVEPESSCGQMGG
SSVSGIALPANTRFKCPRDVSSSDEFSDAAPGADRSLSETSPSTSSYIGDDDYGDDDVPV
DGSANDWLGYMDTFDGELGVACLPEYISYRDKHLTDSVMIFSSSRITVRSSKPYVEEEIF
EFQLGVDDIISVESHWCERFEMGMVKIHIISKGSVFAGDLNATSGVEELKFSIVGDWCGR
QNAIISMDVYKPLWKTVLNSELNCNSELGDNGEVFSDRYFPNFDKAFEDLIYPKGDPDAV
SISKRDIDLLQPDTFVNDTIIDFYIKYLKNKIEPCERHRFHFFNSFFFRKLADLDKNPSS
AVEGRAAFQRVRKWTRKINLFEKDYLFVPVNFNYHWSLIVICYPGEAAESLDPDPHKALR
VPCILHMDSIRGSHSGLKSLLQSYLCEEWKERQKDSSEDISSRFLNLRFLSLELPQQQNS
YDCGLFLLHYAELFLEGVPVNFNPFQLTKFSNFLTANWFVPYEASLKRAFIQRMIYDLLD
NGCSHGTSYGAGSRKEFTSNCLPSSFENGTTNGFIAARCSPSKAFYNNAMGSQTGQELEL
TLLPSVVKSPGCNRDSGLVDADPMESGDAVGSIYQSLEQAENSAPLNKFKNAMLQIEGEK
EADGFCGSTAAAETGLERFVATTYQESNPFSSTEFKGEPSWNLRASVHQIVPDEVKSSLE
KSVCVTDEALDVEMVNHDLEGTNLNFEVNVDQSRPPEDDEECVMVPVTSVPSRILENFYN
SPDHIHYHESEDVNLVTTFPESMLGSSAPDFDAGEEGIMTRSQSFTDAELVTNALQGVVD
HGLEGTNPNFEVNVVQSRPTEDKDLCLRSTPGRIPDIEGAELVINCPQNLLGSSAQDSDA
GEDVEMCKGSQSFPDTDFATNKLHEAKRRKLISLEGRLPENLAGDLHL
NT seq 3027 nt   +upstreamnt  +downstreamnt
atgacgaagagttctctcggtgttttcgacttcgacgaggaagacaacgcagctgaacta
atcgctgccaagtattccggcaaaatcatggactccgaagctcatcaaaattgtgctgag
ggaaaaagcatgcagtttaaggaccgtggcaatgtagcacgtgtggatgttgacggtacc
aatatagacaacaacagtgagtgtgctgcttcatctgcctttatgaatggagaggattgt
gatgttaacatgtctgattttgatgctatgccactcacggtttcctgttttgctgaagag
ctccctcagtcgagaccaattaaagtcgagcctgaaagttcctgtggtcaaatgggaggc
agttcagtatcaggaatagctttacctgcaaataccagatttaaatgccctcgggatgtg
tcatccagcgacgaattctccgatgctgctccaggtgctgatagaagcttgagtgagaca
tctccttcaacttcttcctatattggagatgatgattatggtgatgatgatgttcctgtt
gatgggtctgcaaacgactggcttggctacatggatacgtttgacggggagttgggcgtt
gcatgtttaccagaatatatctcgtatcgtgataaacatctgacagactctgtcatgatc
ttttcaagcagccggatcacagttagaagttcaaaaccttatgtagaagaagaaatcttt
gaatttcagttgggagttgatgatatcatcagtgtcgagtcccactggtgtgaaaggttt
gagatgggaatggtaaagattcacataatttcaaaaggttcagtttttgctggagatcta
aacgccacttcaggtgttgaggagttgaagttttcaattgttggagactggtgtggaaga
cagaatgcaatcatttctatggatgtttacaagcctttgtggaaaactgtgctcaactct
gaactaaattgcaacagtgaacttggggacaatggtgaagtgttctcggatcgttatttt
cccaattttgataaggcttttgaagaccttatctatcctaaaggggatccagatgctgtt
tcaatcagtaagagggacattgatcttctacagccggacacgtttgttaacgacactatt
attgacttctatatcaaatacctgaagaacaaaattgaaccctgtgagagacacaggttc
catttttttaatagttttttcttccggaaactggctgaccttgacaagaacccatccagt
gctgtggaaggcagagctgcatttcagcgagttcggaaatggactagaaaaattaattta
tttgaaaaggattatcttttcgttccagttaatttcaattaccactggagtctcattgta
atatgttaccctggtgaagcagctgaatccctagatcctgatccacacaaggcccttaga
gtaccatgtatattgcatatggattctatcagaggaagtcattctggtctgaaaagtctt
cttcagagttacctgtgtgaggaatggaaggaaaggcaaaaggattcgtcggaagatatc
tcctctagatttttgaatttgagattcctgtcactagagcttccgcagcagcaaaattca
tatgattgtgggcttttcttgcttcactatgcagagctctttcttgaaggagttcctgtt
aatttcaaccctttccaactaacaaaattctccaactttcttaccgcaaattggtttgtg
ccttatgaggcatccctgaagcgggcctttatccagagaatgatctatgatcttctagat
aacgggtgttcacatggaacttcttatggtgctggaagtaggaaggaattcacctcaaac
tgtttgccatcctcattcgaaaatggaactactaatgggtttattgcagctagatgtagt
ccttcaaaagctttctacaataatgccatgggttctcaaactgggcaggaacttgagttg
acgttattaccatccgttgtgaaaagtcctggttgtaatagagattcaggtttggttgac
gcagatcctatggagtcaggtgatgctgtagggtcgatttatcaatctctagagcaggca
gaaaactcagcacctctgaataaatttaagaatgctatgctgcaaatagagggagagaaa
gaggcggatgggttttgtggctccactgctgcagcagaaactggtcttgaaaggtttgtt
gctaccacatatcaagaatctaatccgttctcatctacagaattcaaaggagagccatca
tggaacttaagagcgtctgttcatcagatagtgcctgatgaagttaagtcatcactagag
aaatctgtctgtgtcactgatgaagcattagatgtagagatggtgaatcatgatctcgaa
gggacaaatctgaatttcgaagtgaacgtagatcaatccaggccaccagaggatgacgaa
gagtgcgtaatggttcccgttacctctgtccccagtaggatacttgaaaatttttataac
agtcctgatcatattcactaccatgaaagtgaggatgtgaatttggtcacaaccttccca
gaaagtatgcttggatcatctgccccagattttgatgctggagaggaagggatcatgacg
cgctcacaatcattcactgatgcagagttagtaactaacgcgcttcaaggtgttgtagac
catggtctagaagggacaaatccgaattttgaagtaaacgtagttcaatcgaggccaaca
gaggataaggatctttgccttcgctctacccccgggaggatacctgacattgaaggtgcg
gaattggtcataaactgcccacaaaatttacttggatcatctgcccaagattctgatgca
ggagaggatgtcgagatgtgcaaaggttcacaatcatttcctgatacagattttgcaaca
aataagcttcacgaggctaagagaaggaagcttatatctctcgaaggacggctgccagaa
aatttggcaggggacctgcatctgtag

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (1)   
   Pfam (1)   
All databases (15)   

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