KEGG   Daucus carota (carrot): 108220597
Entry
108220597         CDS       T05350                                 
Name
(RefSeq) TATA-box-binding protein-like
  KO
K03120  transcription initiation factor TFIID TATA-box-binding protein
Organism
dcr  Daucus carota (carrot)
Pathway
dcr03022  Basal transcription factors
Brite
KEGG Orthology (KO) [BR:dcr00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    108220597
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:dcr03000]
    108220597
   03021 Transcription machinery [BR:dcr03021]
    108220597
Transcription factors [BR:dcr03000]
 Eukaryotic type
  beta-Scaffold factors with minor groove contacts
   TATA-binding proteins
    108220597
Transcription machinery [BR:dcr03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIID
     108220597
  RNA polymerase III system
    TFIIIB
     108220597
  RNA polymerase I system
    SL1/TIF-1B
     108220597
SSDB
Motif
Pfam: TBP DUF3378 DUF4295
Other DBs
NCBI-GeneID: 108220597
NCBI-ProteinID: XP_017249892
Position
5:complement(8559643..8562744)
AA seq 200 aa
MAEQVLEGNQPVDLSKHPSGIVPTLQNIVSTVNLDCKLDLKAIALQARNAEYNPKRFAAV
IMRIRDPKTTALIFASGKMVCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVG
SCDVKFPIRLEGLAYSHGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVLTGAKVREE
TYTAFENIYPVLTEFRKNQQ
NT seq 603 nt   +upstreamnt  +downstreamnt
atggcggaacaagtcttggaagggaaccagcccgtggatctttccaagcacccttctgga
attgttcctactcttcagaacatagtctcgacggtcaacttggattgcaagttggactta
aaagccattgcattgcaagcaagaaatgctgaatacaaccctaagcgttttgctgctgtt
attatgcgaatcagggatccgaagacaactgccctaatatttgcttcaggaaaaatggtt
tgtactggagctaagagcgaacaacagtcaaagctggctgcaaggaagtatgcacgaatt
attcaaaagctcgggtttcctgccaaatttaaggacttcaagatacaaaatatagttggt
tcatgtgacgtgaaattccccatcagacttgaaggtcttgcatattcgcacggtgctttt
tctagttatgaaccagaactgttccccggtttgatttatcgtatgaagcaacccaagatt
gtccttctcatatttgtatcaggaaaaattgtgcttactggagcgaaggtgagagaagag
acgtacacagcatttgagaacatataccctgttctaacggagttcaggaagaatcagcag
tga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (3)   
   Pfam (3)   
All databases (14)   

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