KEGG   Daucus carota (carrot): 108222738
Entry
108222738         CDS       T05350                                 
Name
(RefSeq) geranylgeranyl pyrophosphate synthase, chloroplastic
  KO
K13789  geranylgeranyl diphosphate synthase, type II [EC:2.5.1.1 2.5.1.10 2.5.1.29]
Organism
dcr  Daucus carota (carrot)
Pathway
dcr00900  Terpenoid backbone biosynthesis
dcr01100  Metabolic pathways
dcr01110  Biosynthesis of secondary metabolites
Module
dcr_M00366  C10-C20 isoprenoid biosynthesis, plants
Brite
KEGG Orthology (KO) [BR:dcr00001]
 09100 Metabolism
  09109 Metabolism of terpenoids and polyketides
   00900 Terpenoid backbone biosynthesis
    108222738
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01006 Prenyltransferases [BR:dcr01006]
    108222738
Enzymes [BR:dcr01000]
 2. Transferases
  2.5  Transferring alkyl or aryl groups, other than methyl groups
   2.5.1  Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
    2.5.1.1  dimethylallyltranstransferase
     108222738
    2.5.1.10  (2E,6E)-farnesyl diphosphate synthase
     108222738
    2.5.1.29  geranylgeranyl diphosphate synthase
     108222738
Prenyltransferases [BR:dcr01006]
 Terpene biosynthesis
  Prenyl diphosphate synthase
   108222738
SSDB
Motif
Pfam: polyprenyl_synt UbiA
Other DBs
NCBI-GeneID: 108222738
NCBI-ProteinID: XP_017252125
UniProt: A0A164Y4T3
Position
5:complement(13149889..13151538)
AA seq 353 aa
MSHLLSLSATISLTTTHSLHKSPKYPFHSLISIPNPRHKSSLSISSILAQESERPTSSPF
DFKSYVLEKADSVNAALAAAIPLQAPATIHDSMRYSLLAGGKRVRPMLCLAACELVGGDV
SAAMPAACALEMIHTMSLMHDDLPCMDDDDMRRGKPTNHMVFGENVAILAGDALLALAFE
HVARNTKNVSSERVVRAVVELARCIGAEGLVAGQVVDVCSEGDSSVGLELLEFIHVHKTA
ALLEASVVLGAIVGGGCDEDVEKLRKFARCIGLLFQVVDDILDVTKSSQELGKTAGKDLV
ADKTTYPKLIGIDKSRELAKKLNKEAQEQLVGFDADKAAPLVALANYIAYRDN
NT seq 1062 nt   +upstreamnt  +downstreamnt
atgagtcatctccttagcttgagcgcaacaatctcgttaaccacaactcactccctacac
aaatccccaaaatatccattccattccctcatttccattccaaaccctagacacaaatca
tctctctcaatctcttcgattctcgctcaggaatcggagcgcccgacttcttcgcccttc
gatttcaagtcgtatgttctcgagaaggctgattctgtcaacgccgcgctcgccgccgcg
attccgttgcaggcgccggcgacgattcatgactcgatgcgctattctcttctggccggc
gggaagcgtgtgcgccccatgctctgcctcgccgcctgcgagctcgtcggcggcgatgtt
tccgccgcaatgccggccgcttgtgcgctggagatgattcatacgatgtcgctcatgcac
gatgatctgccgtgtatggatgatgatgatatgcggcgcggcaagccgacgaatcacatg
gtgtttggggagaatgtggcgattctggcgggggatgctttgctggccctggcgtttgag
catgtggcgaggaacacgaagaatgtgtcgtcggagagggtagtgagggcggtggtggaa
ttggctaggtgtattggcgccgaaggcttggttgcaggtcaggtggttgatgtttgttct
gagggggattcgagtgtcgggttggagcttttggaatttattcatgttcacaagactgcg
gcattgttggaggcttcggttgtgttgggggcaattgtgggaggtggatgtgatgaggat
gttgagaagttgaggaagtttgcgaggtgtattggtttgttgtttcaagtggtggatgac
attcttgatgtgaccaagtcttctcaagaattggggaaaacggctgggaaagatttagtg
gcggataagactacgtacccgaaattgattgggattgacaagtcgagggagcttgcgaag
aagttgaataaggaggctcaggagcagctcgttgggtttgatgcagataaggctgcgccg
ttggttgctttggctaattatattgcttatagggataattga

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical substance (6)   
   KEGG COMPOUND (6)   
Chemical reaction (6)   
   KEGG ENZYME (3)   
   KEGG REACTION (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (2)   
   Pfam (2)   
All databases (28)   

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