KEGG   Daucus carota (carrot): 108223274
Entry
108223274         CDS       T05350                                 
Name
(RefSeq) probable pectate lyase 5
  KO
K01728  pectate lyase [EC:4.2.2.2]
Organism
dcr  Daucus carota (carrot)
Pathway
dcr00040  Pentose and glucuronate interconversions
dcr01100  Metabolic pathways
Brite
KEGG Orthology (KO) [BR:dcr00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00040 Pentose and glucuronate interconversions
    108223274
Enzymes [BR:dcr01000]
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.2  Acting on polysaccharides
    4.2.2.2  pectate lyase
     108223274
SSDB
Motif
Pfam: Pectate_lyase_4 Beta_helix NosD
Other DBs
NCBI-GeneID: 108223274
NCBI-ProteinID: XP_017252927
Position
5:complement(35907149..35912746)
AA seq 483 aa
MRMRMLSFTCILFSLLATLSPLFIQASTFNLTLPHPDPEAVALQVQRRILASTISKAQQS
CATGNPIDDCWKCDPNWGNNRQRLAECGIGFGQAAGGGKGGQIYVVTDSSDHDVANPTPG
TLRHAVIQTEPLWIVFAANMQIKLKHELIVNSYKTIDGRGANVYITGSGCITLQYVSNVI
VHNIHVYNCVPSGNTNIRSSPTHVGYRGKSDGDGITIFGSRNIWIDHCALSHCTDGLIDI
TMGSTAITISNNYFSHHNEVMLMGHDDRYMPDKGMQVTIAFNHFGQGLIQRMPRCRHGYF
HVVNNDFTEWRMYAIGGSASPTINSQGNRYMAPSDPSAKEVTKRVDTEEGDWAGWNWRTD
GDVLENGAYFVPSGQGLSNQYTKAASVEAKSAAMIDQLTSTAGVLGGPRDNGDRISYSGG
TTTGASSSGGGGSGGEDFFGMIFGSAAPPSTTKGSLFLSILIILVLYMTTSDGALLSLPL
LLL
NT seq 1452 nt   +upstreamnt  +downstreamnt
atgagaatgagaatgctttcttttacctgcattctcttctctctcctggccactctctct
cctcttttcattcaagcttccaccttcaatctaacactccctcatcctgaccctgaagct
gtggctctacaagtccaaagaagaatacttgcctctactatctcgaaagctcagcaatca
tgtgccacaggtaatccaattgatgattgttggaaatgtgacccaaattggggaaacaac
aggcagcgcctggcagaatgtggcattggatttggccaggctgcaggtggaggcaaaggg
ggccagatctatgtagtcacagactcatccgaccacgatgtggctaacccaactccgggc
actcttcgccacgctgtgatccaaactgagcctctttggattgtgtttgcagccaatatg
caaattaagctcaaacacgagctcattgtcaatagttataagactattgatggccgcggt
gctaatgtttacatcactggcagcggttgtatcacattgcagtatgttagtaatgtgatt
gttcacaacattcatgtgtacaattgtgtgccttctgggaatactaatataaggtctagt
cctactcatgttgggtacagagggaaatcggacggtgatgggatcaccatattcgggtct
agaaatatttggatagaccattgtgctctttctcattgtactgatggtctgattgatatt
actatgggctccacagctatcacaatttcaaacaactatttttcgcatcataatgaagtt
atgttaatgggacacgatgatcgttacatgccggataagggaatgcaggtgacaattgca
ttcaatcattttggacaaggattgatacaacggatgcctcggtgtagacacggatacttt
catgttgtaaacaatgattttacagaatggagaatgtatgctatcggtggtagtgctagt
cctacaattaacagccagggcaatcgatacatggcaccgtctgacccatctgccaaggag
gtgactaagcgggttgacacagaagagggagactgggcggggtggaactggagaacagat
ggagacgtattggaaaatggagcatattttgtgccctcaggtcaaggcctcagtaatcag
tataccaaggcagctagtgtcgaggccaaatctgctgccatgattgatcaactcaccagc
actgccggtgttcttggaggccccagggacaatggcgaccgtatatcttacagcggcggg
accaccacgggagcaagtagcagcggcggtggtggtagtggaggtgaagatttttttggc
atgatattcgggagcgccgctccaccatccacgaccaagggcagcctatttttgtcgatt
ttaattattttagttttgtatatgactactagtgatggcgcattattatctttaccatta
ttgttactatag

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (2)   
   KEGG PATHWAY (2)   
Chemical substance (2)   
   KEGG COMPOUND (2)   
Chemical reaction (3)   
   KEGG ENZYME (1)   
   KEGG REACTION (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (3)   
   Pfam (3)   
All databases (19)   

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