KEGG   Daucus carota (carrot): 108223701Help
Entry
108223701         CDS       T05350                                 

Definition
(RefSeq) heat shock cognate 70 kDa protein 2-like
  KO
K03283  heat shock 70kDa protein 1/2/6/8
Organism
dcr  Daucus carota (carrot)
Pathway
dcr03040  Spliceosome
dcr04141  Protein processing in endoplasmic reticulum
dcr04144  Endocytosis
Brite
KEGG Orthology (KO) [BR:dcr00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    108223701
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    108223701
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    108223701
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:dcr01009]
    108223701
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:dcr03041]
    108223701
   03009 Ribosome biogenesis [BR:dcr03009]
    108223701
   03110 Chaperones and folding catalysts [BR:dcr03110]
    108223701
   04131 Membrane trafficking [BR:dcr04131]
    108223701
   03051 Proteasome [BR:dcr03051]
    108223701
   03029 Mitochondrial biogenesis [BR:dcr03029]
    108223701
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:dcr04147]
    108223701
Protein phosphatases and associated proteins [BR:dcr01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-5
    PP5-interacting proteins
     108223701
Spliceosome [BR:dcr03041]
 Complex B
  Other components
   Prp19 complex
    108223701
 Complex C
   Prp19-CDC5 complex
    108223701
Ribosome biogenesis [BR:dcr03009]
 Eukaryotic type
  Pre-60S particles
   Export and cytoplasmic maturation factors
    108223701
Chaperones and folding catalysts [BR:dcr03110]
 Heat shock proteins
  HSP70 / DNAK
   108223701
Membrane trafficking [BR:dcr04131]
 Endocytosis
  Clathrin-mediated endocytosis
   Other core components
    108223701
 Autophagy
  Chaperone mediated autophagy (CMA)
   Chaperones
    108223701
Proteasome [BR:dcr03051]
 Eukaryotic proteasome
  Assembling factors
   Other assembling factors
    108223701
Mitochondrial biogenesis [BR:dcr03029]
 Mitochondrial protein import machinery
  Endoplasmic reticulum membrane and cytosol
   Other ER-memrane and cytosol factors
    108223701
Exosome [BR:dcr04147]
 Exosomal proteins
  Proteins found in most exosomes
   108223701
BRITE hierarchy
SSDB OrthologParalogGFIT
Motif
Pfam: HSP70 MreB_Mbl FGGY_C Hydantoinase_A
Motif
Other DBs
NCBI-GeneID: 108223701
NCBI-ProteinID: XP_017253570
Position
5
AA seq 652 aa AA seqDB search
MAGKGEGPAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVAFTDTERLIGDAAKN
QVAMNPINTVFDAKRLIGRRFSDASVQSDMKLWPFKVVPGAGDKPMIVVNYKGEEKQFAA
EEISSMVLTKMREIAEAFLGKTVKNAVVTVPAYFNDSQRQATKDAGVISGLNVMRIINEP
TAAAIAYGLDKKSSSVGEKNVLIFDLGGGTFDVSLLTIEEGIFEVKSTAGDTHLGGEDFD
NRMVNHFVQEFKRKNKKDIGGNARALRRLRTACERAKRTLSSTAQTTIEIDSLFEGIDFY
TTITRARFEELNMDLFRKCMEPVEKCLRDAKMDKNSVHDVVLVGGSTRIPKVQQLLQDFF
NGKELCKSINPDEAVAYGAAVQAAILSGEGNEKVQDLLLLDVTPLSLGLETAGGVMTVLI
PRNTTIPTKKEQVFSTYSDNQPGVLIQVFEGERTRTKDNNLLGKFELSGIPPAPRGVPQI
TVCFDIDANGILNVSAEDKTTGQKNKITITNDKGRLSKDEIEKMVQEAERYKSEDEEHKK
KVEAKNALENYAYNMRNTIKDEKISSNLGAEDKKKIEDAIEQAIQWLDGNQLAEVDEFED
KMKELEGICNPIIAKMYQGGAGGMGGMGATMDEDGPAGGAGAGAGPKIEEVD
NT seq 1959 nt NT seq  +upstreamnt  +downstreamnt
atggcgggaaaaggcgaaggtccggcgatcggaattgatttgggaacgacgtactcgtgc
gtgggcgtgtggcagcatgatagagtggagatcatagcgaatgatcaggggaacagaacg
acgccgtcttacgtggcttttactgatactgagaggctcatcggtgatgctgccaagaat
caagttgccatgaatccgattaacactgttttcgatgccaagcggttgattggaaggagg
tttagtgatgcttcggtgcagagtgacatgaagttgtggccattcaaagttgtgcctgga
gctggtgacaagccaatgattgttgtcaactacaagggtgaggagaaacaatttgctgct
gaagaaatttcttccatggttcttaccaagatgagggaaattgctgaggctttccttggc
aagacggttaagaatgccgtggttactgtacctgcttactttaacgattcacagaggcag
gcaacaaaggatgctggtgttatttctggccttaatgtgatgcggattattaatgagcct
acagcagctgcaattgcttatgggttggataagaagtcgagcagtgtcggtgagaagaat
gtgctgatcttcgatcttggtggtggcacatttgatgtgtctctcctcactattgaggag
ggtatttttgaggtgaaatccacagctggggatactcatctgggaggtgaagattttgac
aacaggatggtgaatcattttgttcaggagttcaagagaaaaaacaagaaagatattggt
ggtaatgccagagcactgaggaggttgaggactgcttgtgaaagagcaaagagaactctt
tcttcgactgctcaaacaactattgagattgactctttgtttgagggaattgacttctac
acaacaatcactagggcgagatttgaggagctcaacatggatcttttcaggaagtgtatg
gagccagtagaaaaatgtttgagggatgccaagatggacaagaactctgtccatgatgtt
gtgcttgttggtggttctaccaggattccaaaggttcagcaactattgcaagacttcttc
aatggaaaggagctttgcaagagcattaaccctgacgaggctgttgcttatggtgctgct
gtccaggctgcaattttgagtggcgaaggcaatgaaaaggtgcaagacttgttgctgctg
gatgttactccattgtcgcttgggttggaaactgctggtggggttatgactgttttgatc
ccgagaaacacaaccatccccaccaagaaggagcaagtgttttcgacctattctgataat
caacctggtgttttaattcaagtgtttgaaggtgaaagaacaagaacaaaggacaataat
ttgctgggcaagttcgagctttctggtatccctcctgctcctaggggtgtgccacaaatt
acagtgtgctttgatatcgatgcaaatggcattttaaatgtttctgctgaggacaagaca
actgggcaaaagaacaagattaccatcaccaatgacaaaggcaggctctcaaaagacgaa
attgagaagatggtccaggaagcggaaaggtacaaatcagaggatgaggagcacaagaag
aaggtagaagctaagaatgccctggagaattatgcttacaacatgaggaacaccataaag
gatgagaagataagctcgaaccttggcgctgaagacaagaagaaaattgaggatgcaatt
gagcaggcaatccagtggcttgatggtaatcagctggcagaggttgatgagtttgaagac
aaaatgaaggagctggaaggtatctgcaatcccattattgccaagatgtaccaaggaggt
gctggcggtatgggtggcatgggtgcgacaatggatgaagacggtcctgctggaggagct
ggtgcgggagcaggcccaaagattgaagaagttgattaa

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