KEGG   Daucus carota (carrot): 108223923
Entry
108223923         CDS       T05350                                 
Name
(RefSeq) nuclear cap-binding protein subunit 2
  KO
K12883  nuclear cap-binding protein subunit 2
Organism
dcr  Daucus carota (carrot)
Pathway
dcr03013  Nucleocytoplasmic transport
dcr03015  mRNA surveillance pathway
dcr03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:dcr00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    108223923
  09122 Translation
   03013 Nucleocytoplasmic transport
    108223923
   03015 mRNA surveillance pathway
    108223923
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:dcr03019]
    108223923
   03041 Spliceosome [BR:dcr03041]
    108223923
Messenger RNA biogenesis [BR:dcr03019]
 Eukaryotic type
  mRNA processing factors
   5' end processing
    Cap binding complex
     108223923
Spliceosome [BR:dcr03041]
 Common components
  Common spliceosomal components
   Cap binding complex
    108223923
SSDB
Motif
Pfam: RRM_1 DUF5721
Other DBs
NCBI-GeneID: 108223923
NCBI-ProteinID: XP_017253885
Position
5:26607108..26613640
AA seq 265 aa
MALLFKDPNKISAYRDRRFQGSQEEFEHALLTSTTVYVGNMSFYTTEEQAYELFSRAGEI
KKIVMGLDKNTKTPCGFCFIMYYSRDDAEDAVKYISGTILDDRPIRVDFDWGFQEGRQWG
RGRSGGQVRDEYRTDYDPGRGGYGKLVQKELEAQRELVDYGVGSLGSFPPVMPSNYGRNS
GRQGYGGSSRQGRGDYQRKRHREDDRFGPEITKRTSDHDSRRNSDHDSRPEKNPRFRESG
DQEKNPRFRESGDSDEDEDDRKRRP
NT seq 798 nt   +upstreamnt  +downstreamnt
atggccttactgttcaaggatccaaacaagatctctgcgtatagggatagaaggtttcaa
ggttcacaagaagaatttgagcatgctctcctgacttcaacaactgtttatgttggcaac
atgtctttctacacaactgaagaacaagcatacgaactgttctctcgagctggagaaatc
aaaaaaatcgtaatgggattagataagaacactaaaactccttgtggtttttgctttatt
atgtactattctagagatgatgctgaagatgctgttaaatatataagtgggacaatactt
gatgatcgacctattcgtgtggattttgattggggttttcaagaaggaagacaatgggga
cgtggtcgaagtggtggccaggtgcgcgatgaatatcgcactgactatgatcctggcaga
ggtggttatggaaaattagttcagaaggagctggaagcacaaagggaactagtagattac
ggtgtagggtctctgggctcttttccacctgttatgccatctaattatggtagaaacagt
ggaagacagggctatggcggttctagtcgacaaggtagaggagattatcagcggaagaga
catcgggaagatgaccgttttggaccagagatcaccaaaagaacttcagatcatgattct
cgtagaaattctgatcatgactccagaccggaaaagaatccacgtttccgagaaagtggt
gaccaggaaaagaatccacgtttccgtgaaagtggcgattctgacgaggatgaagacgat
cggaaaagacgcccttag

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (3)   
   KEGG PATHWAY (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (4)   
   RefSeq(pep) (4)   
DNA sequence (4)   
   RefSeq(nuc) (4)   
Protein domain (2)   
   Pfam (2)   
All databases (21)   

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