KEGG   Daucus carota (carrot): 108224071
Entry
108224071         CDS       T05350                                 
Name
(RefSeq) transcription initiation factor IIA large subunit-like
  KO
K03122  transcription initiation factor TFIIA large subunit
Organism
dcr  Daucus carota (carrot)
Pathway
dcr03022  Basal transcription factors
Brite
KEGG Orthology (KO) [BR:dcr00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    108224071
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:dcr03021]
    108224071
Transcription machinery [BR:dcr03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIIA
     108224071
SSDB
Motif
Pfam: TFIIA
Other DBs
NCBI-GeneID: 108224071
NCBI-ProteinID: XP_017254109
Position
5:complement(34549381..34556515)
AA seq 389 aa
MASSTATSGVYIQVIEDVINKIRDEFVSNGGPGDAVLLELQGLWEAKMMQAGSILGPIER
SAAPRLAPGGPITPVHDLNVPYEGTEEYETPTADMLFPPTPMQTPMQTPLPGSGQTPLPG
TVQTPGTAELYNIPTGGTPFTPGEYPSENAGGVSEMKPGRPSQFMQPPAPWLNQRPPLDV
NVAYDEGREEIERGASHEPTTQDFFTMSAGKRKRGDFPSQYNNGYIPQQDGAGDALLDAS
KEATAANLEFGRGVSMSSRIPQVDGPTPDPYDDALSTPNIFNYQGVVNEDYNIVNTPAPE
LQAATPAAVAQNDVLDEEDDDEPLNENDDDDDLDDVDQGEDLNTQHLVLAQFDKVTRTKS
KWKCTLKDGIMHINNKDILFNKANGEFDF
NT seq 1170 nt   +upstreamnt  +downstreamnt
atggcgagttcgacggcgacgagcggcgtttacatccaagtcatcgaagatgttatcaat
aagattcgcgatgagtttgtttctaacggcggccccggagacgccgttcttctcgagctt
caaggactgtgggaagccaagatgatgcaagctggttcaatattggggccaattgagagg
tctgctgctcccaggttggcacctggaggtccgattactccagttcatgatcttaatgtt
ccttatgaagggacagaggagtatgagacacctactgctgatatgctgtttcctcccaca
ccaatgcagactcctatgcagacaccattaccggggtcgggtcagacgcctttgccagga
acagttcagacacctgggacagctgagctttataacattccgacgggtggtactcctttt
actcctggggagtacccttctgagaatgctggtggagtttctgagatgaaacctggacga
ccgagccaatttatgcaaccacctgctccctggttgaaccaaaggcccccgcttgatgtt
aatgttgcttacgatgaagggcgtgaagagattgagagaggagcttctcatgagccaact
acgcaggatttcttcacaatgtctgctggaaagcgaaagaggggtgatttcccttcacaa
tataataatggatatataccacaacaggatggagcaggagatgctttattagatgcatcg
aaggaggccacagctgctaatctagagtttggaagaggtgtaagcatgtcttctaggatt
ccacaagtggatggacctactcctgatccatatgatgatgcactctcgacaccaaatata
ttcaattatcaaggagttgtcaacgaagactataatatagtgaacactccagctccagag
ctacaagcagcaaccccagcagctgtcgcccagaatgacgttctagatgaggaggatgat
gatgaacctttgaatgagaatgatgatgatgacgatttggatgatgtagatcaaggagag
gacctaaatacacaacatttggttcttgctcagtttgacaaggttactcgaaccaagagc
aagtggaagtgcactttgaaggatggcattatgcacattaacaacaaagacatcctgttc
aataaggcaaatggagagtttgatttctaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (1)   
   Pfam (1)   
All databases (11)   

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