KEGG   Daucus carota (carrot): 108224564
Entry
108224564         CDS       T05350                                 
Name
(RefSeq) serine/threonine protein phosphatase 2A 59 kDa regulatory subunit B' gamma isoform
  KO
K11584  serine/threonine-protein phosphatase 2A regulatory subunit B'
Organism
dcr  Daucus carota (carrot)
Pathway
dcr03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:dcr00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    108224564
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:dcr01009]
    108224564
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:dcr03019]
    108224564
   03036 Chromosome and associated proteins [BR:dcr03036]
    108224564
Protein phosphatases and associated proteins [BR:dcr01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-2 (PP2A)
    Regulatory subunits
     108224564
Messenger RNA biogenesis [BR:dcr03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Surveillance factors
    Protein phosphatase 2A
     108224564
Chromosome and associated proteins [BR:dcr03036]
 Eukaryotic type
  Centromeric chromatin formation proteins
   Other centromeric chromatin formation proteins
    PP2A (protein phosphatase 2A)
     108224564
SSDB
Motif
Pfam: B56 DUF349
Other DBs
NCBI-GeneID: 108224564
NCBI-ProteinID: XP_017254716
UniProt: A0A164W9V2
Position
6:complement(25512723..25516232)
AA seq 537 aa
MIKQLISKLPKKTSNKSSNNDPETAFSSMNTINSAGADNSSKGGSLSGKGSIISNGNHGP
QSSSVTLKSNQGMQSGSVAARAGQGISYAAYEALPGFREVPSSEKHSLFIKKLNMCSVLF
DFNDASKNLKEKDIKRQTLLELVDYISSVTSKFNEVTMQEITKMIAANLFRALPSNHDDR
LPDVYDPEDDEPTMEPSWPHLQVVYEFLLRFVASSGTDAKLGKRYIDHSFVLRLLDLFDT
DDQREREYLKTILHRIYGKFMVHRPFIRKAINNIFYTFIFETGRHNGIAELLEILGSIIN
GFALPLKEEHKLFLVRVLIPLHKPGSLSMYHQQLSYCITQFVEKDAKLADTVIRGLLNCW
PITNSSKEVMFLGELEEVLEATQTAEFQKCMVLLFRQIGRCLNSSHFQVAERALFLWNND
HIRSMITQNRKVILPIIFPALENNTRIHWNQAVHSLTLNVRKIFIDADQALFEECLAKFQ
EDETKEEERLEMRELIWKRLEDIAASKAASNGAVLVSNFSSSLAIATSANSPKITSS
NT seq 1614 nt   +upstreamnt  +downstreamnt
atgattaagcagttaattagtaagcttcctaagaagacatcgaataagtcttcgaacaat
gaccctgaaactgcattttcatctatgaatacaatcaactcagctggtgctgataatagt
tctaagggtggttcgttatctgggaaaggttcgattattagtaatggtaatcatggtcca
caatcgtcgagtgttactcttaagtcgaatcaagggatgcagtcgggttctgtggctgcc
cgagctggccaggggattagttatgctgcttatgaggctttgcctggctttcgggaggtt
cctagctctgaaaagcacagcctttttatcaagaagttgaatatgtgttctgtgttgttt
gattttaatgatgcttcgaagaatctcaaagagaaggatataaagcgacagactttgctt
gaacttgtcgactacatatcgtctgtaacttccaagtttaatgaggtcacaatgcaggag
atcacgaaaatgatagctgcaaatctttttcgagccttgccatccaatcatgatgacaga
ctaccagatgtgtatgacccagaggatgatgaaccgactatggagccgtcatggcctcat
ctacaggttgtgtatgagtttctcttgagatttgtggcttcttctgggacagatgcaaag
ctcggaaaaagatacattgatcattcctttgtgttgcgattacttgatctctttgatacg
gatgatcaacgagagagggagtatttgaagacaattctccatcgtatatatgggaagttt
atggtgcaccgcccattcattagaaaagccatcaacaatatcttttacacttttatattt
gagactggtcggcacaatgggattgctgagttgcttgaaattttgggtagtataattaat
gggtttgctttacctctaaaagaggaacacaaactttttcttgtccgtgtactcatcccc
cttcacaaacctggaagtttgtcaatgtatcaccaacaactatcgtattgtataacccaa
tttgtggagaaggacgctaagctggctgacacagtaattcgaggtctgttgaattgttgg
ccaataacaaatagctcaaaagaagtcatgtttcttggtgagttggaggaagttttggaa
gccacccagactgcagaattccaaaagtgcatggtccttctgttccgtcagataggtcgc
tgtctcaacagctcacacttccaggtagctgaacgtgcattgtttttatggaataacgat
catataaggagtatgataacacagaatcgcaaggtcatactgcccattatcttcccagcc
ttggagaataacactaggattcactggaaccaagcggttcatagtttgacgctgaatgtg
agaaaaatatttatagacgcagatcaagcacttttcgaagagtgcctagctaagtttcaa
gaagatgaaacgaaagaagaagaaagacttgagatgcgggaattaatctggaaacgctta
gaagatatagcagcgtccaaggctgcaagcaatggggcggtgcttgtctcaaacttttct
tcttctcttgccatagctactagcgcaaattcacctaagatcaccagtagttaa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (2)   
   Pfam (2)   
All databases (15)   

Download RDF
DBGET integrated database retrieval system