KEGG   Daucus carota (carrot): 108226449
Entry
108226449         CDS       T05350                                 
Name
(RefSeq) tubulin alpha chain-like isoform X1
  KO
K07374  tubulin alpha
Organism
dcr  Daucus carota (carrot)
Pathway
dcr04145  Phagosome
dcr04814  Motor proteins
Brite
KEGG Orthology (KO) [BR:dcr00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    108226449
  09142 Cell motility
   04814 Motor proteins
    108226449
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:dcr03019]
    108226449
   03036 Chromosome and associated proteins [BR:dcr03036]
    108226449
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:dcr04812]
    108226449
   04147 Exosome [BR:dcr04147]
    108226449
Messenger RNA biogenesis [BR:dcr03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     108226449
Chromosome and associated proteins [BR:dcr03036]
 Eukaryotic type
  Centrosome formation proteins
   Microtubules and associated factors
    Other tubulins
     108226449
Cytoskeleton proteins [BR:dcr04812]
 Eukaryotic cytoskeleton proteins
  Microtubules
   Tubulins
    108226449
Exosome [BR:dcr04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   108226449
  Exosomal proteins of other body fluids (saliva and urine)
   108226449
  Exosomal proteins of colorectal cancer cells
   108226449
SSDB
Motif
Pfam: Tubulin Tubulin_C Tubulin_3
Other DBs
NCBI-GeneID: 108226449
NCBI-ProteinID: XP_017256901
Position
6:22157899..22160392
AA seq 450 aa
MRECLSIHIGQAGIQVGNACWELYCLEHGIEADGQMASDQSVGXENDAFNTFFSETGSGK
HVPRAVFVDLEPTVIDEVRTGAYRQLFHPEQLISGKEDAANNFARGHYTIGREIVDVCLD
RVRKLADNCTGLQGFLVFHAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTVYPSPQVSTS
VVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLGIERPTYTNLNRLVSQVISSLTA
SLRFDGALNVDITEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQLSVPEITNSAFEPAS
MMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYQAP
TVVPGGDLAKVQRAVCMISNSTSVAEVFSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSE
AREDLAALEKDYEEVGAEAVEGEEEEGEEY
NT seq 1353 nt   +upstreamnt  +downstreamnt
atgagggagtgcctgtcgatccacattggtcaagctggaattcaagtaggaaacgcctgt
tgggaactttactgccttgaacatggcattgaggctgatggacaaatggcgagcgatcag
agtgtaggganagaaaacgatgcgttcaacacgtttttcagtgaaacagggtctggcaaa
cacgtacctcgagcggtgtttgttgatcttgaacctactgtcatcgatgaggttcgtacc
ggcgcctatcgccagttgttccatcccgaacagcttatcagcggcaaggaagatgctgct
aataactttgctcgtggacactacaccattgggagagagatagtggatgtctgccttgat
cgtgtgaggaagcttgcagacaattgcaccggattgcaaggattcttggtttttcatgct
gttggagggggaaccggctcaggccttggctctctgcttcttgagaggctttcggttgac
tatggaaagaaatcaaaactcggcttcaccgtctatccatcccctcaagtttcgacttct
gttgttgagccttacaatagtgtgctttccactcattcccttcttgagcatactgatgtt
gcagtgcttcttgacaatgaagccatttatgacatttgtcgcagatccttgggtattgaa
agaccgacttacaccaatctcaataggcttgtgtcacaggtgatttcgtccttgacagct
tctcttcggtttgatggtgcacttaatgtggatattactgaattccaaaccaacttagtc
ccttacccacgaattcatttcatgctatcttcttatgccccagtgatctctgcagaaaaa
gcataccatgagcagctttcagtaccagaaatcacaaatagtgcatttgagcccgcctcg
atgatggctaaatgtgaccctagacatggcaagtacatggcatgctgtttgatgtatcgg
ggggacgtggtgccaaaggatgtgaatgcagcagtggccactatcaaaacaaagagaacc
attcagtttgtggactggtgtccaactggattcaagtgtggaataaattatcaagcgcca
acagttgttcccggtggggacttggctaaggtccagagggctgtttgtatgatatcaaac
tccacaagtgttgcagaagtattttcaaggattgatcataagtttgatctaatgtacgcc
aaacgtgcctttgtgcattggtacgtaggggaggggatggaagaaggcgagttctcagag
gctcgcgaggacttagctgcactggagaaagattatgaggaagttggtgctgaggcagtt
gaaggtgaagaggaagaaggggaagagtattaa

  All links  
Ontology (5)   
   KEGG BRITE (5)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (3)   
   Pfam (3)   
All databases (17)   

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