KEGG   Daucus carota (carrot): 108227700
Entry
108227700         CDS       T05350                                 
Name
(RefSeq) serine/arginine-rich splicing factor RS31-like isoform X1
  KO
K12893  serine/arginine-rich splicing factor 4/5/6
Organism
dcr  Daucus carota (carrot)
Pathway
dcr03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:dcr00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    108227700
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:dcr03041]
    108227700
Spliceosome [BR:dcr03041]
 Common components
  Common spliceosomal components
   SR proteins
    108227700
SSDB
Motif
Pfam: RRM_1 RRM_5 Nup35_RRM_2 RNA_bind DUF2129
Other DBs
NCBI-GeneID: 108227700
NCBI-ProteinID: XP_017258487
UniProt: A0A164WXL2
Position
6:complement(33167851..33172370)
AA seq 476 aa
MKPVFCGNFDYEARQSDLERLFKRYGNVTRVDMKSGFAFVYMEDERDAEDAIRRLDNIEF
GRKGRRLRVEWTKQERSVRKPENSRRSSSNLRPSKTLFVINFDPYHTRTRDLERHFDPYG
KILNIRIRRNFAFIQFETQEDAIKALEATNMSKLMDRVISVEYAIKDDDERKSGYSPDLV
RDRSPRRRNDDRGRSPSPYRRERGSPDYGHGHGRSPSPYRRERASPDYGRGGSGTPNGRI
RKSHGRGGSRSPNGRDMKADYGRGSRSPIRRERKADYGRGGSLDGRERKADYRRGGSPDG
MERKVDYERGGSPDERERKLDYGHGGSPDGRERKVDSHRGGSRDGRERKADYGRGSSPNG
WERKVDYGRVGSPNVRERKSDYSFEKSPSPPNGKDRISYGRRSSISPERELVSPDLVHSP
SPRERLNPEYDNGHSPSPQTEKVSFDDYNREASPDYKPEMGDSPGYSGGESPMRDH
NT seq 1431 nt   +upstreamnt  +downstreamnt
atgaagcctgttttctgcggtaactttgattatgaggcacggcagtctgatctggaacgg
cttttcaaaagatatgggaatgttactcgtgttgatatgaagtctggttttgcttttgtt
tacatggaggatgagagagatgcagaggatgcaattagaagacttgataacattgagttc
ggtagaaaagggcgacgacttcgtgttgagtggacaaagcaagaacgtagtgtgcggaag
cctgaaaactctaggagatcttcatctaacttgaggccctcaaagactttgtttgttata
aactttgatccttatcatacaaggacaagggacttggagaggcactttgatccatatggg
aagatattgaacataaggattagaaggaatttcgcatttatccagtttgaaacacaggaa
gatgccatcaaagctttagaagcaacaaacatgagcaagctgatggaccgagttatttca
gtggaatatgctataaaagatgacgacgaaagaaaaagtggatacagtcctgatttggtc
cgtgataggtctccgcgtaggagaaatgatgataggggaagatctcctagcccttacagg
agagaacggggaagtcctgattatggccatggtcatggtcgtagccctagtccttatcgc
agagaacgtgccagtcctgattatggtcgtggtggtagtggtactcccaatggaaggata
agaaaatctcatggccgtggaggtagtaggagtccgaatggaagggatatgaaggctgac
tatggtcgtgggagtaggagtcctatcagaagagagaggaaagctgactatggccgtggt
ggcagtctagatggaagggaaaggaaagctgactaccgccgtggtggcagtcctgatgga
atggaaaggaaagttgactacgaacgtggtggtagtcctgatgaaagagaaaggaaactt
gactacggccatggtggcagtcctgatggaagggaacggaaagttgattcccaccgtggt
ggcagtcgtgatggaagggaaaggaaagctgactatggccgtggttcaagtcctaatgga
tgggaaaggaaagttgactatggacgtgttggcagtcctaatgttagagagaggaaatct
gactacagttttgagaagagtccaagcccaccaaatggtaaggaccgaatctcctatggc
cgtcggagcagcattagtcctgaaagagagttggttagtcctgaccttgttcatagtcct
agcccaagagaaaggcttaaccctgagtatgataatggtcacagtccaagccctcaaaca
gaaaaagttagttttgatgattacaatcgggaggctagcccagattacaagcctgaaatg
ggggacagtccaggatacagtggaggagagagccctatgcgggaccactga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (4)   
   UniProt (1)   
   RefSeq(pep) (3)   
DNA sequence (3)   
   RefSeq(nuc) (3)   
Protein domain (5)   
   Pfam (5)   
All databases (20)   

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