KEGG   Dendrobium catenatum: 110098814
Entry
110098814         CDS       T05027                                 
Name
(RefSeq) polyadenylate-binding protein 4-like
  KO
K13126  polyadenylate-binding protein
Organism
dct  Dendrobium catenatum
Pathway
dct03015  mRNA surveillance pathway
dct03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:dct00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    110098814
  09123 Folding, sorting and degradation
   03018 RNA degradation
    110098814
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:dct03019]
    110098814
   03041 Spliceosome [BR:dct03041]
    110098814
Messenger RNA biogenesis [BR:dct03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    eIF4F and regulatory proteins
     110098814
   mRNA cycle factors
    Stress granule specific factors
     110098814
Spliceosome [BR:dct03041]
 Complex C
  Other components
   Complex C specific factors
    110098814
SSDB
Motif
Pfam: RRM_1 PABP RRM_5 RRM_3 CitG
Other DBs
NCBI-GeneID: 110098814
NCBI-ProteinID: XP_028557027
Position
Unknown
AA seq 616 aa
MATDTTPTAVAVSPVPALYIGDLHQDVTDPNLFELFSTIGDIASVRVCRDSVSGCSLGYG
YVNYMSEQDAENAIEKLNYSVLCGKPIRIMWSHKDPVARNSGVGNIFVKNLSGSIDNLKL
QAMFGKFGTILSSKVALQDGKSKGYGFVQFDSQDSANAAIENLNGTTVDGKKLFVNKFIK
KSERIPCNLEAKYTNLYMKNLDQDITEELIELKFSEYGKIFNVKIAKDEAGNSRGFGFVN
FENPEDAKKAVEAMNGLRLGSKKLYVARAQKKDERLQILQHTFEEKRNEQIRNNMASNLY
IKNIDDCVDDNALWEYFSQCGTVASAKVMHDEKGNSKGFGFVCYTTPEEASNAVNTLHGS
MFHGKPLYVAIAQRKEERAEQLRLQYAQRMNGLAGSATAVVPTVYPTLYYSPPGVMPQIS
ARQGIVYQPFGLRPGWRPSGFVPPSRPTFQPMPLPIIPNTPRQQRQNRGRMNGHFLPQSG
QSMPYMAPLQQPNHSLNYLKDNNSQEFVQNGRRWGMNNLPLGLSASSNPQGMEQLSSRLA
AAPLQQQKQMLGERLFPLVQKLKADLAAKITGMLLEMDNSELLLLLESPDALAAKVEEAV
QVLKLSKTQVSELIRK
NT seq 1851 nt   +upstreamnt  +downstreamnt
atggcaacggatacaacgccgactgcggtggcggtttcgccggttcccgcactgtacatc
ggggacctacaccaggatgtaactgatccgaaccttttcgagcttttctcaaccattggc
gatatcgcttctgttcgcgtctgccgggattccgtctccgggtgctcgcttggctacggt
tatgtcaattatatgtctgagcaggatgctgaaaatgctatcgagaaattaaactacagt
gttttgtgcgggaagcccattaggattatgtggtcacacaaggatccagttgctaggaac
agcggggttggaaatatatttgtgaagaacctaagtggatccattgacaatttgaaactt
caagctatgtttgggaaattcgggactatcttgtccagcaaagtggctttgcaggatgga
aagagcaaaggttatggctttgtccagtttgattcgcaagattctgcaaacgctgccata
gaaaatctgaacggtacaacagttgatggcaagaaactctttgtgaataagttcataaaa
aagagtgagcgaattccctgcaatcttgaagccaagtatacgaacctgtacatgaaaaac
ttggatcaggatataacagaagaacttattgaactaaagttttcagagtatggaaaaatc
tttaatgtgaagattgcaaaggatgaagcaggaaactcaagaggatttgggtttgtaaac
tttgaaaaccctgaggatgctaaaaaggcagtggaggcaatgaatggacttcggctggga
tcaaagaaactatatgttgcaagggcccaaaagaaggatgagcgactacaaattttgcag
catacgttcgaggaaaaacggaatgaacagattagaaataatatggcttcaaatctgtat
attaagaacattgatgattgtgttgatgacaatgctctgtgggagtatttcagtcaatgc
ggtactgttgcctcggcaaaagttatgcacgatgagaaaggaaacagtaaaggtttcggg
tttgtttgttatactactccagaggaggcttcaaatgcagtgaatactcttcatggaagc
atgttccatggaaaacctttatatgttgcaattgcccaaaggaaagaggaaagagcagaa
cagttgcgtcttcagtatgcccaaagaatgaatggtttggctggttcagcaaccgctgta
gtccctactgtttatcccacactttactacagccctccgggagttatgccacaaatttct
gcccgacaaggtattgtatatcaaccttttgggctgagaccaggatggcggccaagtgga
tttgttcccccatctaggccaacttttcagccaatgccgcttccaattattcctaatact
cctagacaacaaaggcaaaacaggggtcggatgaatggacattttctgcctcaatctggg
caatctatgccatacatggctccgttgcaacagcctaaccattctctgaattatttgaaa
gataataatagccaagagtttgtacaaaatggaaggcggtggggcatgaataatttgcct
cttggtctttctgcttcatctaatccacaagggatggagcagctcagtagcaggctcgct
gcagctccactacagcaacagaaacagatgctcggcgaacgcctattcccattggtccag
aaactcaaggcagatctggctgctaaaataacggggatgttgttggagatggataactcc
gaattgctattgctgttggagtcgcctgatgcacttgctgcaaaggtggaagaagctgtt
caagtattgaaactctccaaaactcaggtgagtgaactgattagaaaataa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (53)   
   KEGG ORTHOLOGY (1)   
   RefGene (49)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (5)   
   Pfam (5)   
All databases (66)   

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