KEGG   Dendrobium catenatum: 110102030
Entry
110102030         CDS       T05027                                 
Name
(RefSeq) coatomer subunit alpha-1
  KO
K05236  coatomer subunit alpha
Organism
dct  Dendrobium catenatum
Brite
KEGG Orthology (KO) [BR:dct00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:dct04131]
    110102030
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:dct04147]
    110102030
Membrane trafficking [BR:dct04131]
 Endoplasmic reticulum (ER) - Golgi transport
  Retrieval pathways
   Coat protein complex I (COP-I)
    110102030
Exosome [BR:dct04147]
 Exosomal proteins
  Exosomal proteins of other body fluids (saliva and urine)
   110102030
  Exosomal proteins of bladder cancer cells
   110102030
SSDB
Motif
Pfam: COPI_C Coatomer_WDAD WD40 ANAPC4_WD40 NBCH_WD40 Fis1_TPR_C ENTH IKI3 PAPS_reduct zf-CHCC zf-ribbon_3
Other DBs
NCBI-GeneID: 110102030
NCBI-ProteinID: XP_020685833
Position
Unknown
AA seq 1222 aa
MLTKFETKSNRVKGISFHRKRPWIISSLHSGVIQLWDYRVGTLIDRFEEHDGPVRGLHFH
KLQPLFVSGGDDYKIKVWNYKTRLCLFTLLGHLDYIRTVQFHDEYPWVVSASDDQTIRIW
NWQSRVCISVLTGHNHFVMCASFHPKEDLVVSASLDQTVRVWDIGALRKKTVTPADDTLR
LSQMNTDLFGGVDAVVKYILEGHERGVNWASFHPNSPLIVSGADDRQVKLWRMNDTKAWE
VDTLRGHMNNISCVMFHAKQDIIVSNSEDKSIRVWDATKRTAIQTFRREHDRFWILSVHP
EMNLLAAGHDSGMIVFKLERERPAFSVSGNSLYYVKDRFLRFYEFSSQKDNQVFPIRKAG
AISLNQSPRTLSFSSTENAILVCSDADGGSYELYVVPRDNGGKADVVPDAKRGGGSAVFV
ARNRFAVLDKSSNQALVKNLKNEIIKKSSLPIATDAIFYAGTGNLLCRAEDKLVIFDLQQ
RLILGEIQVPSVKYIVWSSDMETVALISKHTIVITCKKLVHRCTLHETIRVKSGAWDENG
VFIYATLNHIKYCLPNGDNGVIRTLDVPVYITKVSGNNINCLDRDGKNQVIAVDATEYVF
KLSLLRKKYDNVLTMIRSSQLCGQAIIAYLQQKGFPEVALHFVKDERTRFNLGLESGNIQ
IAVASAKEIDEKDHWYRLGIEALRQGNTSIVEYAYQWTKNFERLSFLYLITGNRLKLSKM
LRIAEMKNDVMGQFHNAMYLGDIPTRVAILENAGQLPLAYITALTHGLIETAERLAAELG
DNVPVIPEGKVHSLLLPPTPLISGGDWPLLRVMRGIFAGRLDVAGRPGHEEEEEEEEEEA
SGAEWGEEDLDIVDADPVIKNGGIDAKVDVVEGNEENGGGWDLEDLDLPPDADIPVAAGN
ARASVFVAPTQGLPVSQIWIKKSSLAGEHAAAGNFETAMRLLNRQLGINNFAPLKQIFLE
LYMGSHTYIHAFTKAPVILTAINAWNESASPNVRDPPSLTFKFSQMDEKLKAAYRTTTEG
RFPEALRLFLNILHIIPLVVVDSRREVDEVKELIEIAKEYVLGLKIEVKRKEIKGDVIRQ
QELSAFFTNCKLQKVHSRLVLTSAMITCFKGGNYATAANFARMLLENSPTENQSRKARQV
LQACGDKKDAHQLNYDYRNPFVVCGATFVPIYRGQKDVSCPYCGARFIPSIQGQQCTICE
IAVVGADASGLLCSPAQGKLLG
NT seq 3669 nt   +upstreamnt  +downstreamnt
atgctgaccaagttcgagaccaagagtaatcgggtaaaggggattagctttcacaggaag
aggccttggataatttctagtcttcatagtggagtgatacagctatgggactatcgcgtg
ggaactcttatcgaccgttttgaagagcacgatggacccgtgcgcggactccattttcat
aaattgcagccgttatttgtttccggaggtgatgattacaaaattaaggtctggaattac
aaaacacgcctttgcttgtttactcttcttgggcaccttgactacattcgtacagtacaa
ttccatgatgaatacccttgggttgttagcgcaagtgatgatcaaactattaggatttgg
aactggcagtctcgtgtctgcatttcagttttgactggccacaatcactttgtgatgtgc
gcgtcattccatccaaaggaggatcttgttgtatctgcttccctggatcagactgtccgt
gtttgggatatcggtgccctgaggaagaaaacagtaaccccagctgatgatactttgcgt
ctgagccagatgaacacagatctatttggcggtgttgatgcagttgtcaaatatatctta
gagggtcatgagcggggagtcaattgggcatcatttcatcctaattcgcctctcattgtc
tctggtgcagatgatcggcaagtaaaattatggagaatgaacgatacaaaggcatgggaa
gtggacacgttgagagggcatatgaacaatatttcttgtgtgatgttccatgcaaaacag
gatattatcgtgtccaattctgaggacaaaagcattcgtgtctgggatgcgactaagcgt
actgctattcagacatttcgccgagagcatgatcgtttttggattctgtctgtgcatcca
gaaatgaatctacttgctgctggccatgacagtggaatgatagtattcaaactagagaga
gagcgtcctgctttttctgtcagtgggaactccctatattatgtcaaagatcggttttta
aggttttatgagttttcatctcagaaggataatcaagtgttcccaataaggaaagctggt
gctataagcttgaatcagagtccaagaacactctctttcagctcaacagagaatgctatc
ttggtatgttctgatgcagatggaggttcttatgagctctatgtagttccaagagacaat
ggtggaaaggcagatgttgttccggatgcgaagagaggaggagggtctgctgtttttgtt
gcccgcaacaggttcgccgtgttagacaagagcagcaatcaggcattagtcaagaatctt
aagaatgagattataaaaaagagttcccttcctattgctacagatgcaatcttttatgct
ggaactggtaatctgttgtgcagggctgaagataagttagtcatctttgatcttcaacag
cgtctcattctaggggaaattcaggtaccttcagtcaaatatattgtttggtcaagcgac
atggaaactgttgcattgatcagcaagcataccatagttattacctgcaagaaacttgtt
caccgttgtacactgcatgagacaatccgtgtgaaaagtggtgcctgggatgagaatggc
gtcttcatctatgcaaccttgaaccacattaagtattgcctccctaatggggacaatgga
gttataaggactctggatgtaccagtatacataactaaggtttctggcaacaatatcaat
tgtttggatcgtgacgggaagaatcaggtgatagcagttgatgctacagagtatgttttt
aagctttcgcttcttaggaaaaaatatgacaatgttttgactatgatcaggagttcacaa
ttgtgtgggcaggctattattgcatacctgcaacaaaaaggatttcctgaggtagctctt
cactttgttaaagatgagagaaccagattcaacttaggtcttgagagtggtaacatccag
atagctgttgcttctgcaaaggagatagatgaaaaggaccattggtacagattaggcatt
gaagcccttcgacaagggaataccagtattgtagaatatgcttatcagtggactaaaaac
tttgaaagattatcttttttgtatctcatcactggtaataggttgaagctatcaaaaatg
ttgaggatcgctgaaatgaagaatgatgttatgggtcagttccacaatgctatgtatctg
ggcgatatcccgacacgcgtggcaatattggaaaatgctggccagttgcctcttgcatat
atcacagctttgactcacgggctcattgaaactgcagaaagacttgccgctgaattgggg
gataacgttcctgtcataccagaaggtaaagtccattctcttttgctgccaccaacccca
ctcatcagtggcggcgactggccattgttgagggtcatgaggggcatttttgcgggcaga
ttagatgttgctggaaggccagggcatgaagaagaagaagaagaagaagaagaagaagct
tctggtgctgaatggggtgaagaagatttggatattgttgatgcggaccctgtaataaaa
aatggtggtatagatgcaaaagttgatgttgttgaaggaaatgaagaaaatggaggagga
tgggatcttgaggatctggacttacctcctgatgcagacattccagtggctgcaggtaat
gcccgagcatccgtttttgttgctcctactcaaggcttgcctgtgagtcaaatttggatt
aaaaaatcatctcttgctggggagcatgctgcagctggaaacttcgaaaccgcaatgcgc
ctacttaaccggcagctaggtataaataattttgctccattgaagcagatatttctggaa
ttatacatgggtagtcatacatatattcatgcttttactaaggctccagttatattaacg
gccattaatgcctggaatgagtctgccagtcctaatgttagggatccgccatctttaaca
ttcaagttctcacaaatggatgaaaaactcaaggctgcttaccgaacaacaacggaaggg
aggttcccagaggctttaagactatttctcaatatcttacacatcatccctcttgttgtt
gtggattctagaagagaggttgatgaagtcaaggagctaattgagatcgctaaagagtat
gttttgggcttgaagattgaagtcaaaagaaaggaaatcaaaggtgatgtgattcggcaa
caagagctttcagcattctttacaaattgtaagcttcagaaggttcactcaaggttggtt
ctcacaagtgccatgatcacttgtttcaagggaggaaattatgctacagcagccaatttc
gcaaggatgcttttagagaatagcccaactgagaatcaatcaagaaaggcaagacaagtt
ctgcaggcctgtggtgataaaaaggatgctcatcagctcaattatgattacagaaatcct
tttgtggtatgtggagccacctttgttccaatataccgtggacaaaaggatgtctcatgt
ccttactgtggggctagatttatcccttccattcaaggacagcagtgcactatttgtgag
attgcggtggtcggcgcagatgcatcaggtcttctctgctctccagctcagggaaaattg
ttaggttag

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (15)   
   KEGG ORTHOLOGY (1)   
   RefGene (11)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (11)   
   Pfam (11)   
All databases (32)   

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