KEGG   Dendrobium catenatum: 110103273
Entry
110103273         CDS       T05027                                 
Name
(RefSeq) sm-like protein LSM5
  KO
K12624  U6 snRNA-associated Sm-like protein LSm5
Organism
dct  Dendrobium catenatum
Pathway
dct03018  RNA degradation
dct03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:dct00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    110103273
  09123 Folding, sorting and degradation
   03018 RNA degradation
    110103273
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:dct03019]
    110103273
   03041 Spliceosome [BR:dct03041]
    110103273
Messenger RNA biogenesis [BR:dct03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     110103273
  mRNA degradation factors
   5'-3' decay
    Lsm complex
     110103273
Spliceosome [BR:dct03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   LSm proteins
    110103273
SSDB
Motif
Pfam: LSM Ntox4
Other DBs
NCBI-GeneID: 110103273
NCBI-ProteinID: XP_020687575
Position
Unknown
AA seq 87 aa
MSHNPSQLLPSELIDRCIGSKIWVIMKGDKELVGTLRGFDVYVNMVLEDVTEYEITAEGR
RITKLDQILLNGNNIAILVPGGSPDPE
NT seq 264 nt   +upstreamnt  +downstreamnt
atgtctcataacccttctcagctccttccttcagaattgatcgatcggtgcattggttca
aagatctgggttattatgaagggagacaaggagctcgtgggaaccctaagaggtttcgat
gtctatgtcaacatggttctcgaggacgtcaccgaatatgaaataactgctgaagggcgg
aggataaccaaacttgaccaaatattgttgaatggaaacaacattgccattcttgtccct
ggtggttcccctgaccctgaatga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (12)   
   KEGG ORTHOLOGY (1)   
   RefGene (8)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (2)   
   Pfam (2)   
All databases (22)   

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