KEGG   Musicola paradisiaca: Dd703_3009
Entry
Dd703_3009        CDS       T00927                                 
Name
(GenBank) exodeoxyribonuclease V, gamma subunit
  KO
K03583  exodeoxyribonuclease V gamma subunit [EC:3.1.11.5]
Organism
dda  Musicola paradisiaca
Pathway
dda03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:dda00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    Dd703_3009
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:dda03400]
    Dd703_3009
Enzymes [BR:dda01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.11  Exodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.11.5  exodeoxyribonuclease V
     Dd703_3009
DNA repair and recombination proteins [BR:dda03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecBC pathway proteins
     Dd703_3009
SSDB
Motif
Pfam: Exonuc_V_gamma RecC_C
Other DBs
NCBI-ProteinID: ACS86784
UniProt: C6CC24
Position
complement(3505320..3508706)
AA seq 1128 aa
MFRVYHSNQLDVLKELMVELMKRHPIRDPFEPEMILVQSPGMAQWLQIELANCFHIAANI
QFPLPGVFLWDMCRRLMPDIPKESVFSKAAMSWKLMHLLPQQLAEPDFALLANYLRDDAD
GRKLHQLSARVADLFDQYLIYRPDWINAWQRGAWVEDAGEAQRWQAPLWRALVAHTHQLG
QPEWHHSSLYQQFIGRLELADTCPPGLPERVFICGIAALPPIYLQALKALGKHIDIHLLF
TNPCRYYWGDIQDESFLSRLKTRQWQRYREKQVTSDVRPLFRQPERADGLFGDDGEQQVG
NPLLASWGKLGRDNLFLLEQLDETVGIDAFADMASDTLLASLQRDILELEDSRIIATDGI
TLASSSRKRTLSPADRSVSLHACHSPQREVEVLHDQLLAMMAEDSTLMPRDIIVMVADID
SYSPFIQAVFGNAPENRYLPFALSDQRARHAHPALQAVLSLLALPDSRFTAEQVLALLEV
PSLAGKFAIDEEGLRHLRMWVAESGVRWGLDDDNVRELLLPVTGQHTWRFGLTRMLLGYA
MESRAGDWLGVLPYDESSGLVAELAGNLADFLMQLSQWKQRLQEARSLTDWQPLCRQLLD
GFFLPDADTEAALTLIETQWQQILSTAMLTGYAQNVPVGTLRDELAARLESERLSQRFLA
GAINFCTLMPMRSIPFRVVCLLGMNDGVYPRVLPPLGFDLMARSRRRGDRSRREDDRYLF
LEALLSAGQRLYISFMGHSIQDNTRRYPSVLVTELMNYIGQSYCLPGDESLDLDASSERV
IQALSHEHPRMPFDPAGFCAPEPESFAAEWLPAAGGKGVCQPDFDRALPERYDSDITLDD
LQRFYRHPVRAFFQLRLGVYFQLDDQEMQDQEPFEVDNLSRYQMNVQLLNALIEQGDTDA
LYRRMRAAGGLPYGAFGELYWQTQQEDIRELAERVRGEWRPETHHTRELNLTINGVRLSG
WLKQVQDDGLLRWRPGKLSMTDGMMLWLEHLAWCLAGGQGESRIYGRQSTGWRFPAMSRQ
QAGDEMASLIDGYRQGMNRPLLLLNRTGGAWLEAVYDRDTDRLLDDATAQRKARQKLLDA
WQGNQMVSGESEDDYLRRIVRAMDDERIVQVMDAAKIWLLPPLRMNQC
NT seq 3387 nt   +upstreamnt  +downstreamnt
atgttcagggtctaccactccaatcaactcgatgtgttgaaagaactgatggttgagctg
atgaaacggcatccgatcagggatccgttcgagcctgaaatgatactggtgcaaagcccc
ggtatggcgcaatggctacagattgaactggcgaattgctttcacattgccgctaatatt
cagtttccgctgccgggggtctttttgtgggatatgtgccgacgcctgatgccggatatc
cccaaagagagcgtattcagcaaagcggcgatgagctggaagctgatgcacctgctgccg
caacagcttgcggagcctgactttgcgctgctcgccaactaccttcgggatgatgccgac
gggcgcaaactgcatcagttgtccgcccgcgtggcggatctgttcgaccagtatctgatt
tatcggcccgactggattaacgcctggcaacgcggcgcatgggtggaggacgccggagag
gcgcagcgctggcaagcaccgctgtggcgggcgttggtcgcgcatactcatcaacttggg
cagccggagtggcaccattccagcctgtatcagcagtttatcggccgtctggaactggct
gatacttgcccgcccggtttgccggagcgggtgttcatctgcggtattgccgccttaccg
cccatctatctgcaagccttgaaagcgttgggcaaacacatcgatatccacctgctgttc
accaatccatgccgctactattggggggatattcaggacgaatctttcctttcccgcttg
aaaacacggcagtggcagcgttatcgcgaaaaacaggtgacatcggatgtgcggccgctg
tttcgtcagccggagcgtgccgatgggctattcggcgatgacggcgaacaacaggtgggc
aatcccctgctcgcatcgtggggaaaactggggcgcgataatctgttcctgctggaacaa
ctggacgaaaccgtaggcattgatgcatttgccgacatggcttccgatacgctgttggct
tcgctgcagagggatattctggaactggaggatagccgcattatcgctacggacggcata
acgctggcgagcagcagccgtaaacgcacgctttcgccagcggatcgctctgtgtcgttg
cacgcttgccacagcccgcaacgcgaggtggaagtgttgcatgatcaattgctggcgatg
atggcggaggacagtaccctgatgccgcgggacatcattgtgatggtggcggatatcgat
agctattccccttttattcaggcggtgttcggcaatgcgccggaaaatcgctatttaccc
tttgcattgtcagatcagcgtgcgcgtcacgctcaccccgcgctgcaggcggtgttgtcg
ctgctggcgttgccggatagtcgtttcacggctgaacaggtgttggcgttactggaggtg
ccgtcgttggcgggcaaattcgccatcgacgaagaagggctgcggcacctaaggatgtgg
gtggccgaatccggtgtacgttggggactggatgatgacaatgtacgagagctgctgttg
ccggtgacggggcagcacacctggcgcttcggcctgactcgcatgctgctgggctatgcg
atggagagtagagcgggtgattggttaggtgtgctgccttacgacgaatcgagtggtctt
gttgccgaactggccggcaatctggcggattttctgatgcagctaagtcagtggaaacag
cgtttgcaggaagcgcgctcgctgacggattggcagccgttatgccgccagttattagac
ggtttttttctgccggatgccgataccgaagcggcgttgacgctgattgaaacccagtgg
caacaaattctgtctaccgccatgttgacgggatacgcacagaatgtgccggtcggtacg
ttgcgcgatgagctggctgctcgtctggagagtgaacgcctcagccagcgttttctcgcc
ggggccatcaacttctgtactctgatgccgatgcgttccattccatttcgggtggtatgc
ctgctgggcatgaacgatggcgtgtatccgcgtgttctgccgccgctggggttcgatcta
atggcgcgctcccgtcggcggggggatcgcagccgccgcgaagacgatcgctacctgttt
ctggaggcgcttttgtccgctgggcagcgtctctacatcagcttcatggggcattcaata
caggacaacacccggcgttacccttcagtgctggtaacggaactgatgaattatatcggc
caaagctactgcttgccgggagatgaaagcctggatcttgacgccagcagcgagcgcgtt
attcaggcgttgagtcatgagcacccgcgtatgccgttcgatcccgccggtttttgtgcc
ccggagccggaaagtttcgcggcggagtggttgccggctgccggaggcaaaggggtatgc
caacctgatttcgatcgcgccttgccggagcgttatgacagcgacatcacgctggatgac
ctgcaacgattttatcgtcatccggtgcgcgcattctttcagttacgccttggcgtttat
tttcagctcgacgatcaggaaatgcaggatcaagagcctttcgaggtggataacctcagc
cgttatcagatgaatgtacagttgcttaatgcgttgatagaacaaggtgatacggatgcc
ttgtatcgacgcatgcgtgcggcgggtggtttgccgtatggcgcgttcggtgagctctac
tggcagacccagcaggaggacatccgggaactggcagaacgggtgcggggagagtggcgg
ccggaaacccaccacacacgcgagctgaatctgacgataaacggcgtcaggctcagcggt
tggttaaaacaggttcaggacgacggcctgctgcgctggcggcctgggaaattgtccatg
acggacggcatgatgctatggctggagcatcttgcctggtgcctggccggcgggcagggg
gaaagtcgaatctatggtcgtcaatcgacggggtggcgtttccccgccatgtcccggcag
caggccggggatgagatggcgtcgttgatcgacggctaccgtcaggggatgaaccggccg
ttgttgttgcttaatcgtactggcggcgcctggctggaggccgtctacgatcgcgatacc
gatcgtttgctggatgatgcaacggcgcaacgcaaagcacggcaaaagttgctggatgcc
tggcagggaaaccagatggtcagtggcgaaagtgaagatgactacctgcggcgcattgtt
cgcgctatggacgacgaacgtatcgtgcaggtgatggacgcggcaaaaatctggctattg
ccgccgctgagaatgaatcagtgttag

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (17)   
   KEGG ORTHOLOGY (1)   
   RefGene (14)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (2)   
   Pfam (2)   
All databases (26)   

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