KEGG   Dickeya parazeae: Dd586_3115
Entry
Dd586_3115        CDS       T01138                                 
Name
(GenBank) DEAD/DEAH box helicase domain protein
  KO
K05590  ATP-dependent RNA helicase SrmB [EC:3.6.4.13]
Organism
ddc  Dickeya parazeae
Brite
KEGG Orthology (KO) [BR:ddc00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:ddc03009]
    Dd586_3115
Ribosome biogenesis [BR:ddc03009]
 Prokaryotic type
  rRNA helicases
   Dd586_3115
SSDB
Motif
Pfam: DEAD Helicase_C ResIII AAA_19 AAA_11 AAA_22 CMS1
Other DBs
NCBI-ProteinID: ACZ77950
UniProt: D2BUA3
Position
3545660..3547012
AA seq 450 aa
MTATNFSEFDLDDSLLDALRDMGFSRPTAIQAEAIPPAMEGRDVLGSAPTGTGKTAAYLL
PVLQHLLDFPRKKSGPPRILILTPTRELAMQVADQARALAAHTHLDIATITGGVAYMNHA
EVFSENQDVVVATTGRLLQYIKEENFDCRAVETLILDEADRMLDMGFAQDIEHIAGETRW
RKQTMLFSATLEGDAIQDFAERLLNDPAEVEADPSRRERKKILQWYYRADDIQHKTALLS
HLLKQPDVTRSIVFVRKRERVHELVDWLRSAGIESCYLEGEMVQAKRNEAIKRLSEGRVK
VLVATDVAARGLDIQDVSHVFNFDLPRTSDIYLHRIGRTGRAGRKGSAISLVEAHDYLLL
DKIGRYLNEPLKARVIDELRPSTRAPSPKSNGKPSKKVLAKRKEQKEKEKEKQKVKVKVR
HRDSKNIGKRRQPSAKASAEQPKEKPADNT
NT seq 1353 nt   +upstreamnt  +downstreamnt
atgactgcgaccaatttttccgagtttgatcttgatgacagcctgcttgacgccttgcgc
gacatgggcttcagccgtccaaccgccattcaggccgaagctattcctccggcgatggaa
gggcgggatgtactgggctccgcaccaaccggaaccggcaaaaccgcagcctatctgctg
ccggttttacaacacctgctggattttccacgtaaaaaatccggcccgccgcggatcctg
atcctgacaccgacccgggaactggcgatgcaggtggccgatcaggctcgggcgttggcg
gctcatactcatctggacattgcgaccatcaccggtggggtggcttatatgaaccacgct
gaggtgtttagcgaaaatcaggatgtggttgtcgccacgaccggtcgtttattgcaatac
atcaaagaagagaattttgactgtcgtgcagtcgaaaccctgattctggatgaagcagac
cgcatgctggacatggggtttgcgcaggacatcgagcatattgctggtgaaacccgctgg
cgtaagcagaccatgctgttctctgcaacgcttgaaggggatgctattcaggattttgcc
gagcgactgctcaacgaccctgccgaagtggaagccgatccatcgaggcgtgagcgtaaa
aaaattctgcaatggtactaccgtgctgatgacattcagcacaagacagcgctactcagc
cacctgctcaagcagccggacgtcacgcgttccatcgtgtttgtgcgtaaacgtgagcgg
gtgcacgaactggtagactggttgcgatctgctggcatcgaatcctgttacctggaaggg
gaaatggtgcaggccaaacgcaatgaggccatcaaacggttgagcgaaggccgggtgaaa
gtgctggttgctacagatgtcgccgcacgcggtctggatattcaggatgtcagccacgtg
ttcaacttcgatttaccccgcacgtctgacatttatctgcatcgcattggccgtaccgga
cgagcgggccgtaaaggcagtgctatctcgctggtcgaagcgcatgactatctgctgctc
gataaaattggtcgttatctcaacgagccattgaaagcgcgcgtcattgatgaattacgc
ccgagcacccgcgcgccaagccccaaatctaacggtaagccatcgaaaaaagtgctggct
aagcgcaaagaacagaaagaaaaagagaaagaaaagcagaaagtgaaggtcaaggtgcgc
caccgcgatagcaaaaatatcggtaagcgtcgtcagcccagcgccaaagcgtcagcggaa
caaccaaaagaaaaaccagcggataatacctga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (7)   
   Pfam (7)   
All databases (15)   

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