KEGG T01305: Dda3937

Dickeya dadantii 3937: Dda3937_01572

Entry

Dda3937_01572     CDS       T01305

Symbol

rluD

Name

(GenBank) 23S rRNA pseudouridine synthase

K06180

23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]

Organism

ddd Dickeya dadantii 3937

Brite

KEGG Orthology (KO) [BR:ddd00001]
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:ddd03009]
    Dda3937_01572 (rluD)
Enzymes [BR:ddd01000]
5. Isomerases
  5.4  Intramolecular transferases
   5.4.99  Transferring other groups
    5.4.99.23  23S rRNA pseudouridine1911/1915/1917 synthase
     Dda3937_01572 (rluD)
Ribosome biogenesis [BR:ddd03009]
Prokaryotic type
  rRNA modification factors
   23S rRNA modification factors
    Dda3937_01572 (rluD)

SSDB

Motif

Pfam:

PseudoU_synth_2 S4 TruB_N S4_2

Other DBs

NCBI-ProteinID:

ADM99646

UniProt:

E0SC49

Position

complement(3680814..3681791)

AA seq 325 aa
MSQQVQLTATVAESQLGQRLDQALAELFPDYSRSRIKTWILEQRVQINGKMVDKPKEKVL
GGESVAIDALIEEDARWEAQPISLDIVYEDEDILVINKPRDLVVHPGAGNPDGTVLNALL
HHYPEIVDVPRAGIVHRLDKDTTGLMVVAKTVPAQTRLVESLQAREITREYEAVAIGTMT
AGGTVEEPIARHSTKRTHMAVHPMGKPAVTHYRIMEHFRAHTRLRLRLETGRTHQIRVHM
AHINHPLVGDPLYGGRPRLPKGASEAFIETLRNFDRQALHATMLRLYHPISGIEMEWHAP
LPQDMVELIAALKADTDAFKDQLDW

NT seq 978 nt +upstreamnt +downstreamnt
atgtcccaacaagtacaactcaccgcgacggtggccgaatctcaacttggacaacgttta
gatcaggctttggccgaattgttccctgattattcacgctcacgcataaaaacgtggatt
ttggaacaacgggtacagattaacggcaagatggtggataaaccaaaagagaaagtgctt
ggcggggagtctgtcgctattgatgctttgatcgaagaagacgcccgctgggaagcgcag
ccgatctcgctggatatcgtctatgaagacgaggatattctggtgatcaataaaccgcgc
gatttggtggtgcatcctggcgccggtaaccctgacggcaccgtgctgaacgcgttgttg
catcactatccggagattgtcgatgtgccgcgtgcggggattgttcaccgtctggataag
gacaccaccggtctgatggtggtagctaagactgtgccggcccagacccggctggtggag
tcgctgcaggcgcgtgaaatcacccgtgaatatgaagcggtggcgatcggcacgatgacg
gccggcggtacggtggaagagccgattgcccgtcactccaccaaacgcacgcacatggcg
gtgcacccaatgggaaaaccggccgtgacgcattatcgcatcatggaacatttccgtgct
catactcgcctgcgtttgcggctggaaacaggccgaacccaccagattcgcgtccacatg
gcgcacatcaaccatccgctggtgggcgacccgttgtatggcggtcgtccgcgtttgccc
aaaggcgcttccgaggcatttatcgagacgctgcgcaattttgatcgtcaggcgctgcac
gccaccatgttgcgcttgtatcatcctatcagcggtatcgagatggagtggcatgcccca
ttgccgcaggatatggtagaactgattgccgccctgaaagcggataccgacgcgtttaaa
gatcaacttgactggtga

All links

Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (4)   
   Pfam (4)   
All databases (13)   

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