KEGG   Dickeya dadantii 3937: Dda3937_02116
Entry
Dda3937_02116     CDS       T01305                                 
Symbol
mnmC
Name
(GenBank) bifunctional 5-carboxymethylamino-methyl-2-thiouridine oxidoreductase/5-aminomethyl-2-thiouridine methylase
  KO
K15461  tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein [EC:2.1.1.61 1.5.-.-]
Organism
ddd  Dickeya dadantii 3937
Brite
KEGG Orthology (KO) [BR:ddd00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:ddd03016]
    Dda3937_02116 (mnmC)
Enzymes [BR:ddd01000]
 2. Transferases
  2.1  Transferring one-carbon groups
   2.1.1  Methyltransferases
    2.1.1.61  tRNA 5-(aminomethyl)-2-thiouridylate-methyltransferase
     Dda3937_02116 (mnmC)
Transfer RNA biogenesis [BR:ddd03016]
 Prokaryotic type
  tRNA modification factors
   Other tRNA modification factors
    Dda3937_02116 (mnmC)
SSDB
Motif
Pfam: DAO Methyltransf_30 NAD_binding_9 Pyr_redox_2 Pyr_redox_3 FAD_oxidored NAD_binding_8 FAD_binding_2 Pyr_redox HI0933_like NAD_binding_7 GIDA FAD_binding_3
Other DBs
NCBI-ProteinID: ADM99314
UniProt: E0SLA2
Position
3325202..3327220
AA seq 672 aa
MTSPSIQHAKLNWNAQGTPVSQQFDDVYFSNQDGLAETRYVFLQGNGFPQRFLTHPGPVC
TVAETGFGTGLNFLTLWQAFEQFRQQQPNAALQRLHFISFEKFPLRQSDLAAAHASWPEL
TSFADELRRHWPLALPGCHRLILAQGRITLDLWFGDVNALLPTLDHSLTQRIDAWFLDGF
APAKNPDMWTDALFNAMARLCRNEGTFATFTAAGFVRRGLQQAGFDVSKIKGFGQKREML
RGAVTHSGEQPHPTPWYARPAASHPQDVAIVGGGIAAVLTALALLRRGARVTLYCADDQV
GQRASGNRQGALYPLLNDKQDGLSGFFATAFGFARRCYDALAAQGVTFEHDWCGVSQLAY
DEKSTRKITQILAGNWPDALVRPADARTLTEQVGVPLRTHGITYPLGGWLCPAELTASAF
TLACRQGLQAHLSTTVSALTHTDSGWQLTLADGSQKQHATVVLANGHQINDWEQTRHLPV
YPVRGQVSHVPDTPALSALRQVLCYDGYLTPVSPHHHTHCIGASYHRGDTGTDYRETDQQ
HNRQRLMDCLPDSDWPADVDISGQQARCGVRCAIRDHLPLLGQVPDYSQTLTDYQDLPRQ
IAAGDEVTVAPSWPNLYLIGALGSRGLCSAPLAAEILASQLFSEPLPLDSDTLAALHPHR
FWVRKLLKGKAV
NT seq 2019 nt   +upstreamnt  +downstreamnt
gtgacaagcccttccatccagcatgcaaagctaaactggaacgctcagggtacacctgta
tcgcaacagtttgatgacgtttatttctccaaccaggatggcctggcggaaacccgctac
gtctttctgcagggcaacggttttccgcagcgttttctcacgcatcccggcccggtctgc
accgtggcggaaaccggcttcggcaccgggctgaatttcctgacgttgtggcaggcgttc
gaacagtttcgccagcagcaaccgaatgccgcgttgcagcggctgcacttcatcagtttt
gagaaatttccgctgcgccagtcggacctggccgccgcgcacgccagttggccggaactg
acctctttcgccgacgaactacgccggcactggccgctggcgctgcccggttgtcaccgg
ctgattctggcgcaggggcgcatcacgctggacctgtggttcggcgacgtcaacgccctg
ctgcccacactggaccacagcctgacccagcgtatcgacgcctggtttctcgacgggttc
gccccggccaaaaacccggacatgtggaccgatgcattgtttaacgccatggcgcgcctg
tgtcgcaacgaagggacgttcgcgacctttaccgcggccggttttgtgcgtcggggattg
caacaagcaggatttgacgtcagcaaaatcaagggattcgggcagaagcgggaaatgctg
cgcggcgcggtgacgcacagcggtgaacagcctcatcctaccccctggtatgcacggccg
gcagcctcacacccgcaggacgtggcgatcgtcggcggcggcatcgcggcggtattaacc
gcgctcgcgctgctgcgacgcggcgcgcgagtgacgctgtactgcgccgacgaccaggtg
gggcaacgcgcctccggcaatcgtcagggcgcgctctatccgttgctgaatgacaagcag
gatggattgtcggggttcttcgccaccgcgttcggcttcgctcgccgctgctacgacgcc
ctcgccgcacagggcgtgacgtttgaacacgactggtgcggcgtcagccaactggcctac
gatgaaaaaagcacgcgcaaaataacccagatactggccggcaactggccggatgcgctg
gtgcggccggcagatgcacgcacgctaaccgaacaggtcggcgtgccgctacgcacccac
ggcatcacctacccgctgggaggctggctgtgcccggccgagctgaccgcatcggccttt
acgctggcctgccggcagggcctacaggcgcatttatctaccaccgtctcagcgctaacg
cacaccgacagcggctggcaactgacgctggcggatggcagccagaaacagcacgccacg
gtggtgctggccaacggccatcagatcaacgactgggaacagacccgacatctgcccgtt
tacccggtgcgcggccaggtcagccacgtccccgacacgccggcgctgtctgcgctgcgt
caggtgctgtgctacgacggctatctgacgccggtcagcccgcatcaccacacccactgt
atcggcgccagctatcatcgcggcgatacgggcaccgattaccgtgaaaccgatcagcag
cacaaccgtcagcggctgatggactgcctgcccgacagcgactggcctgccgacgtggat
atctccgggcaacaggcgcgttgcggcgtgcgctgcgccattcgcgatcatctgccgttg
ctcggtcaagtgccagattacagccaaacgctgaccgactatcaggatctgcccagacag
attgccgcgggtgatgaggtgaccgttgccccatcctggccgaatctctatctgatcggc
gctttggggtcacgcggcttatgttctgcgccgctggccgccgagattctggcatcgcag
ctgttcagcgaaccgctgccgctggacagcgatacgctggcggcgctgcacccccatcgt
ttttgggtaagaaaattgctgaaaggcaaagcggtataa

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Ontology (3)   
   KEGG BRITE (3)   
Chemical substance (9)   
   KEGG COMPOUND (9)   
Chemical reaction (3)   
   KEGG ENZYME (1)   
   KEGG REACTION (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (13)   
   Pfam (13)   
All databases (33)   

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