KEGG   Oleidesulfovibrio alaskensis: Dde_0003
Entry
Dde_0003          CDS       T00294                                 
Name
(GenBank) DNA gyrase, B subunit
  KO
K02470  DNA gyrase subunit B [EC:5.6.2.2]
Organism
dde  Oleidesulfovibrio alaskensis
Brite
KEGG Orthology (KO) [BR:dde00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:dde03032]
    Dde_0003
   03400 DNA repair and recombination proteins [BR:dde03400]
    Dde_0003
Enzymes [BR:dde01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.2  DNA topoisomerase (ATP-hydrolysing)
     Dde_0003
DNA replication proteins [BR:dde03032]
 Prokaryotic type
  DNA Topoisomerases
   Dde_0003
DNA repair and recombination proteins [BR:dde03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Facilitator
      Dde_0003
SSDB
Motif
Pfam: DNA_gyraseB DNA_gyraseB_C HATPase_c Toprim HATPase_c_3 GyrB_hook ZNHIT3_C SASA
Other DBs
NCBI-ProteinID: ABB36804
UniProt: Q317S2
Position
2797..5190
AA seq 797 aa
MTNETQKQSYDAANITVLEGLSAVRMRPAMYIGSTDSRGLHHLVYEVVDNSIDEAMAGYC
DKVTVKLHLDNSVTVIDNGRGIPVDIHPKEGRPAVEVVMTVLHAGGKFDNDSYKVSGGLH
GVGVSCVNALSEYLEVTVRRDGYKYHHRFERGVPVKELERVGETDLRGTTIRFRPDEEIF
ETNQFSFDILKKRFEELAYLNPGLEVEFIDERTGDTASFHYEGGIREFVKNLNSGEGGVH
SIIFASGESDNVMVDFALQYNAGYKENMLTFANNIRTKEGGTHLAGFKTALTRAINNYIQ
NSDLPKKLKVKLSGDDVREGLTGVVSVKLPNPQFEGQTKTKLGNSEVAGIVSGLVYENLN
TYFGENPKDAKLIIEKAVDAARARDAARKAKDLVRRKGALSDNALPGKLADCQSKDPSES
ELFIVEGDSAGGSAKQGRNPSTQAILPLRGKILNVEKTRFDKMLANKEVKALITAMGAGI
GEEDIDYGKLRYHKIVIMTDADVDGAHIRTLLLTFFYRQYPELIDRGHLYIAQPPLFRVY
NSKFERFIKDETELNTYLLERIAKDVVIEAHNGMEFRETQILDLLKAIRFINARIADVEN
VGIGRNLFLAFLEYGEKLSPQFFEAPEFNGFGTYLQEKGYSVQTSVDESGLERRVYLEFE
DSNGHKTRIGNEFFNSKMYKQPYDSMADMRRICGGFSFVVDRKGERTEVENIFVLLDHVL
QEARKGINIQRYKGLGEMDAEQLWVTTMNPENRVLLQVQVDDAEEANEIFEQLMGDRVEP
RREFIVRNALSVQELDI
NT seq 2394 nt   +upstreamnt  +downstreamnt
atgaccaacgagacacaaaagcagagctacgacgcggcgaacatcaccgttcttgagggg
ttgtccgctgtgcgcatgcgccctgccatgtacataggcagcactgacagccgcggtctg
caccatctggtttacgaagtggtggataactccatcgacgaagccatggcgggatactgc
gataaagtcaccgtgaagctgcatcttgataacagcgtgaccgttattgataacggacgc
ggcattcccgtggacatccacccgaaagaaggccgtcccgcggttgaagtggtcatgacc
gtgctgcatgccggcggcaagttcgacaacgattcgtacaaggtgtcgggcgggctgcac
ggggtgggtgtttcgtgcgtgaacgccctttccgaatatctcgaagttaccgtgcgtcgt
gacgggtataaatatcatcaccgctttgaacgcggtgtaccggtcaaggaactggagcgc
gtcggagaaaccgacctgcgcggcaccaccatccgcttccgtccggacgaagaaattttt
gagaccaatcagttttccttcgatatcctcaaaaaacgctttgaggagctcgcgtacctc
aatcccgggctcgaggtcgagttcatagacgaacgtaccggagataccgcctcgtttcat
tacgaggggggtatccgtgagtttgtgaagaacctgaactccggcgaaggcggggtgcac
tccatcattttcgcttcgggcgaatcggataacgtgatggtggatttcgcgttgcagtac
aacgcggggtataaggaaaacatgctcacctttgccaacaacatccgcaccaaggaaggc
ggcacgcaccttgccggcttcaagaccgcgctcacaagggccatcaacaactacatccag
aactccgacctgcctaaaaagctcaaggtcaaactgtcgggtgatgatgtgcgggaaggt
ctgaccggcgttgtcagtgttaaactgcccaatccgcagtttgaagggcagacaaagacc
aagctgggcaacagcgaggtggcgggtattgtctccggtctggtgtatgaaaatctcaac
acctacttcggcgaaaaccccaaagatgccaagctgatcatagaaaaggccgtggatgcc
gcccgtgcacgtgacgccgcccgcaaggcgaaggatcttgtacggcgcaaaggggcgctt
tccgacaatgccctgcccggcaagctggctgactgccagagcaaggatccctcggaatcc
gaactgttcatcgtggaaggtgactccgcaggcggttctgcaaaacaggggcgcaatcct
tccactcaggccattctgccgttgcgcggtaaaattctgaacgtggaaaagacccgcttt
gacaagatgctggccaacaaggaagtcaaggctctcatcacggccatgggggcgggaata
ggcgaagaagacatcgactacggcaagctgcggtaccacaaaatcgtcatcatgaccgac
gccgacgtggacggtgcccacatacgcacgctgctgctgacgttcttctatcgccagtat
cccgagctgatagacagggggcacctgtatatcgcccagccgccgcttttccgtgtgtac
aacagcaagttcgagcggtttatcaaagatgaaaccgagctgaacacctatctgctggaa
cgcattgccaaagacgtcgtcatcgaggcgcataacggcatggagttccgtgaaacgcag
atactcgacctgctgaaagccatacggttcatcaatgccagaattgccgacgtggaaaac
gtgggaataggccgtaatctctttctcgcgtttcttgaatacggcgaaaaactgtcgccc
cagttttttgaggcgcctgaattcaacggcttcggaacgtatctgcaggaaaaaggctat
tccgtgcagaccagcgttgacgaatccggactggaacgccgtgtgtacctggaatttgaa
gacagcaacgggcacaagacccgcatcggcaacgagttcttcaactccaagatgtacaaa
cagccttacgattcgatggccgacatgcgccgcatctgcggcggattctcgtttgtggtg
gaccgcaagggcgaacggaccgaagtggaaaacatcttcgttctgctggaccatgtgctg
caggaagcgcgcaagggtataaacatccagcggtataaaggtctgggcgaaatggatgcc
gaacagctttgggtgaccaccatgaaccccgaaaaccgcgtgctgctgcaggtacaggtg
gatgacgcggaagaggccaacgagatatttgaacagctcatgggcgacagggttgaaccg
cgccgcgaattcatcgtgcgtaatgccctgagcgttcaggaactggatatttaa

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Ontology (4)   
   KEGG BRITE (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (8)   
   Pfam (8)   
All databases (18)   

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