KEGG   Oleidesulfovibrio alaskensis: Dde_1922
Entry
Dde_1922          CDS       T00294                                 
Name
(GenBank) UvrD/REP helicase
  KO
K03581  exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]
Organism
dde  Oleidesulfovibrio alaskensis
Pathway
dde03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:dde00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    Dde_1922
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:dde03400]
    Dde_1922
Enzymes [BR:dde01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.11  Exodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.11.5  exodeoxyribonuclease V
     Dde_1922
DNA repair and recombination proteins [BR:dde03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecBC pathway proteins
     Dde_1922
SSDB
Motif
Pfam: AAA_19 AAA_30 HHH_4 UvrD_C_2 SH3_13 Viral_helicase1 AAA_11 UvrD-helicase AAA_16 RsgA_GTPase Herpes_Helicase PIF1 T2SSE HHH_5 SLFN-g3_helicase PMT2_N PhoH DUF6079
Other DBs
NCBI-ProteinID: ABB38719
UniProt: Q310C7
Position
complement(1974891..1977119)
AA seq 742 aa
MPKRNESNPARLRGRIERVYYAGPKFSAGRLLTPTGEEVQFAGNLFARENQPVVLLGSWA
THPKYGRQFKVDGMEHDLELDPEGLIHYLANHPEIKGIGPAKARLIVESFGDAFEETLLN
DPERIALKARLPLDAARRLRDEWLKNRSVNAVMAWLSAFGLTHHQVTTLVERLGGNCLDI
LKEDPYILIREIRGFGFKKVDKIARKLGTPKDHTPRIRAGLNFCVREALDNGHCWIEYED
LVDQANLLLVMDALDSRVRIESALDALIEEQALACDSHGGRFVVALPEIVRMERELALLF
GQAETPNPHFQSVKKLDALIRRCASTLNEKQLDAVRSALQHSISLISGGAGSGKSYTISV
INTICEESDLEVVLAAPTGKAAKRLEEVSGRSGTTIHRLLGYDGKGFSRSKENPIDADVL
VVDEFSMVDVPLAWHLFEAVDLSRTTVLLVGDHNQLPPVGPGNILRDLIQTRAIPTVILD
KVVRQAGVLKENCTAVLKGEVRKTSEASVSGCRDWYLVDQFTDPMAARSFLLELFQERLD
TLGFDIIKDVQVLTPTHKGPLGTKELNEELQRLIQRKLWNTEVPPVAMGRRAPFLKHDKV
IQTRNNYDLNVMNGAIGYVVDVLANGTLVIDFDGMPVELEKGSPDLQDLQLAYALTIHKT
QGSEFPCAVVVIHKAHSFMHHRNLLYTGVTRARRTAIVLGDHWGIQNCAKRCQVDDRRTF
LPLFLDAAQHADADSARVAEAE
NT seq 2229 nt   +upstreamnt  +downstreamnt
atgccaaaaagaaatgagagtaacccggcgcgactccggggaagaatagagcgcgtttac
tatgccggacccaagttctccgcaggccgactgctcaccccgaccggtgaggaagtccag
ttcgcgggcaatttgttcgcccgggaaaatcagcctgtggtcctgctcgggtcgtgggcc
acccatcccaaatacggccgtcagttcaaggtcgacgggatggagcacgacctcgaactc
gatccggaggggctgatccactatctggccaaccatccggagatcaagggcattggtccg
gccaaggccagattgatcgtcgagagtttcggcgacgcctttgaagaaacccttctgaat
gaccccgagcgcatcgcgctcaaagctcggctgcccttggatgctgcccggcggctgcgt
gacgaatggttgaagaaccgcagcgtcaacgccgtcatggcctggttgtcggcattcgga
ctgacccatcatcaggtcaccactctggtcgaaagactcggcggcaactgcctcgatatt
ctgaaggaagacccgtacatcctcattcgggagatccggggattcggcttcaagaaggtc
gataagatcgcccgcaagcttggcacccccaaggaccacacccctcgtatccgcgctggg
ttgaatttctgcgtccgtgaagccctggacaatggtcactgctggatcgaatacgaggat
ctggtggaccaggccaatctgctgctggtcatggatgccctggacagccgggtccgcatc
gagagcgccctcgacgcgctcatcgaagaacaggcgcttgcctgcgattcccacggcgga
cgtttcgtggtcgctctgccggagatcgtccgcatggagcgggagctggccttgttgttc
ggccaggccgaaacaccgaatcctcatttccagtccgtcaagaaactcgatgccctgatt
cggcgctgcgcatcaacgctgaacgagaagcagctcgacgcggtccgctcggccctccag
cacagcatcagcctgatttcgggtggagccggttcgggcaagagctacaccatttcggtc
atcaacaccatctgcgaggagagcgacctggaggtcgtgctcgccgcgccgaccggcaag
gccgccaagcgcctggaggaagtcagcggtcgcagcggcaccaccattcaccgtctgctc
ggctatgacggcaagggtttctcgcgcagcaaggagaatcccatcgatgccgacgtcttg
gtggtcgacgagttttcgatggtcgacgtgccgctggcctggcacctgttcgaggcggtc
gatttgtcgcggaccacggtgctgctggtcggggaccacaaccagcttccgccggtggga
cccggaaacatactgcgcgatctgatccagacacgcgccatccccacggtcatcctcgac
aaggtcgtgcgccaggctggcgtcctcaaggagaactgcaccgccgttctcaagggcgag
gtgcgcaagaccagcgaggcgtcggtatccggatgccgggattggtacctggtagatcag
ttcaccgatccgatggctgcacgctcgttcctgctggagctgtttcaggagcggctcgac
accctgggattcgacatcatcaaggacgtgcaggtgctgacgccgacccacaagggaccg
ctcggcaccaaggaactgaacgaggaactgcagcggctcatccagcgcaagctctggaac
accgaggtgccgccggtcgccatgggccgccgcgccccgtttctcaagcacgacaaggtc
atccagacccggaacaactacgatctgaacgtgatgaacggggccatcggctatgtggtc
gatgtcctcgcgaacggcaccctggtcatcgacttcgacggcatgccggtggagctggag
aagggttcgcccgacctgcaggatctgcagctcgcctatgcgctcaccatccacaaaacc
cagggttccgagttcccctgcgccgtcgtggtgatccacaaggcgcattccttcatgcat
caccgcaacctgctctacaccggggtgacccgcgcccggcgcaccgccattgtcctgggc
gaccattggggcatccagaactgcgccaagcgttgccaggtggatgaccgccggaccttc
ctgcccctgtttctggacgccgcccagcacgcggatgccgattccgcccgtgtcgcggag
gccgaatga

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