KEGG   Desulfovibrio alaskensis: Dde_3079Help
Entry
Dde_3079          CDS       T00294                                 

Definition
(GenBank) cysteine desulfurase NifS
  KO
K04487  cysteine desulfurase [EC:2.8.1.7]
Organism
dde  Desulfovibrio alaskensis
Pathway
dde00730  Thiamine metabolism
dde01100  Metabolic pathways
dde04122  Sulfur relay system
Brite
KEGG Orthology (KO) [BR:dde00001]
 09100 Metabolism
  09108 Metabolism of cofactors and vitamins
   00730 Thiamine metabolism
    Dde_3079
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04122 Sulfur relay system
    Dde_3079
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:dde03016]
    Dde_3079
   03029 Mitochondrial biogenesis [BR:dde03029]
    Dde_3079
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic Defense System [BR:dde02048]
    Dde_3079
Enzymes [BR:dde01000]
 2. Transferases
  2.8  Transferring sulfur-containing groups
   2.8.1  Sulfurtransferases
    2.8.1.7  cysteine desulfurase
     Dde_3079
Transfer RNA biogenesis [BR:dde03016]
 Eukaryotic Type
  tRNA modification factors
   Thiolation factors
    Dde_3079
 Prokaryotic Type
    Dde_3079
Mitochondrial biogenesis [BR:dde03029]
 Mitochondrial quality control factors
  Regulator of mitochondrial biogenesis
   Proteins involved in Fe-S cluster biogenesis
    Dde_3079
Prokaryotic defense system [BR:dde02048]
 DNA phosphothiolation system
  Sulfur modification proteins
   Dde_3079
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif
Pfam: Aminotran_5 Beta_elim_lyase Aminotran_1_2 DegT_DnrJ_EryC1 Cys_Met_Meta_PP Aminotran_3
Motif
Other DBs
NCBI-ProteinID: ABB39873
UniProt: Q30WS3
Position
3068898..3070088
Genome map
AA seq 396 aa AA seqDB search
MRTIYMDNNATTAVDPAVLDEMLPYLKDLYGNPSSMHTFGGQVGRQVAEARERVARALGA
QPEEILFTSCGTESDNTAIMSALQAQPEKKHIITTRVEHPAVLNLVQHLEKKGYEATYLS
VDEKGRLDLDELRGALRKDTAIVSVMYANNETGTIFPIKEIAAIVKEKGALFHTDAVQAV
GKLHINVQEVPVDFLALSGHKLHAPKGVGALYVRRGTPYRPFLRGGHQERGRRAGTENVA
GIIALGKACELASLNMETERTTVKALRDRLENGLLNAIPEAIINGDTDNRLPNTTNIAFK
YVEGEAILLLMDGHGICASSGSACTSGSLEPSHVLRAMGVPFTYAHGSIRFSLSRFNTQA
DVDYVVDELPRIIARLREISPYRSGEDAQAKPACTC
NT seq 1191 nt NT seq  +upstreamnt  +downstreamnt
atgcgcaccatatatatggacaacaacgccaccaccgccgttgaccccgccgtgctggac
gaaatgctgccgtacctgaaagacctgtacggcaacccttccagcatgcacaccttcggc
gggcaggtaggccgtcaggtggccgaggcccgcgaacgcgtggcgcgtgcgctgggcgcc
cagcccgaagaaattctcttcacctcgtgcggcaccgaaagcgacaacactgccatcatg
tccgccctgcaggcccagcctgaaaaaaaacatatcatcaccacccgcgtggaacacccc
gctgtgcttaatctggtacagcatctggaaaaaaaggggtatgaagccacgtatctgagt
gtggatgaaaaaggacgtcttgatctggatgagctgcgcggtgccctgcgcaaagacacg
gccatcgtttccgtgatgtacgcaaacaatgagaccggcaccatttttcccatcaaggaa
attgcagccatcgtcaaggaaaagggcgcgctttttcacacagacgcagtgcaggccgtc
ggcaaactgcatataaacgtgcaggaagtgcctgtggatttccttgcgctttccggccac
aagctgcacgcccccaaaggtgtgggagcgctgtacgtgcgccgcggcactccgtaccgg
ccttttctgcggggcggacatcaggaacgcggccgccgtgccggcacggagaatgtggcc
ggcatcattgcgctgggcaaagcctgcgagctggcttccctgaatatggaaaccgaacgc
accaccgtcaaggcgctgcgcgacaggctggagaacggcctgctcaatgccatacccgaa
gccatcatcaacggtgatacggacaacagactgcccaatacaaccaatatcgccttcaaa
tatgtcgaaggcgaagccattctgctgctgatggacggacacggcatatgtgccagctcc
ggttcggcatgcacttcaggcagccttgagccttcgcacgtactgcgtgccatgggagtg
ccgttcacctatgcccacggctccatccggttcagcctgagccggttcaacacacaggcg
gatgtggactacgtggtggacgaactgccgcgcatcatcgcccgtctgcgtgaaatatcg
ccctaccgcagcggtgaagacgcgcaggcaaagcctgcgtgtacctgctga

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