KEGG   Deferribacter desulfuricans: DEFDS_0141
Entry
DEFDS_0141        CDS       T01188                                 
Name
(GenBank) DNA polymerase III, gamma/tau subunits
  KO
K02343  DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
Organism
ddf  Deferribacter desulfuricans
Pathway
ddf03030  DNA replication
ddf03430  Mismatch repair
ddf03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:ddf00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    DEFDS_0141
   03430 Mismatch repair
    DEFDS_0141
   03440 Homologous recombination
    DEFDS_0141
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:ddf03032]
    DEFDS_0141
   03400 DNA repair and recombination proteins [BR:ddf03400]
    DEFDS_0141
Enzymes [BR:ddf01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     DEFDS_0141
DNA replication proteins [BR:ddf03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     DEFDS_0141
DNA repair and recombination proteins [BR:ddf03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     DEFDS_0141
SSDB
Motif
Pfam: DNA_pol3_delta2 AAA DNA_pol3_gamma3 RuvB_N AAA_24 AAA_22 AAA_5 AAA_14 DnaX_C AAA_16 Rad17 AAA_19 Glyco_tranf_2_5 AAA_2 AAA_30 AAA_18 AAA_assoc_2
Other DBs
NCBI-ProteinID: BAI79653
UniProt: D3PAN0
Position
148706..150286
AA seq 526 aa
MGYLALARKYRPQSFDEIVYQDYIVKTLKNAIELNRISHAYLFTGPRGIGKTSTARIFAK
ALNCLSPEGVNPCNKCENCVEVTNGTSLDVYEIDGASNRGIDEIRQLRESVKFLPTKSKY
KIYIIDEVHMLTEAAFNALLKTLEEPPSYVIFIFATTDAHRIPATILSRCQRFNFSKIPD
LKLIEHIRSILERENIEYEEDAVNLIVRNSDGCVRDCLSLIDQVIAYTGGKVFLDDTKYL
LGLSEDKIINELFEKIILKDNDSIKQLLSEIDLKGLDYKYVVEKFLSFTKTLLILKQFND
KNDVSLTNDERVFFDRLLDYVDDGYLFAVHQVLLKMYNDLRFYSFDKDIFEIGVFKLLNL
EKILPISAFSSDNKMSENKDSKIKKIEPQPVTNLSDKDKLWKDFIDKLGEKRPNIASNLG
YGYLIAIENDKLVIGFSEEKVFHYNIIMKNGNLDYVKKAAERFFDGVKDVVIKLENGSKK
KGVIEKVTEIETFKDKMLKNELKENSAVKLIENEFDATIKEIKLDK
NT seq 1581 nt   +upstreamnt  +downstreamnt
atgggttatttagctttagcaagaaaatatagacctcaatcttttgatgagattgtatat
caagattatattgttaagacattaaaaaatgctatagaactaaacagaataagtcatgct
tatctttttactgggcctagaggtattggtaaaacgagtactgcgaggatttttgcaaag
gcattaaactgtttgagccctgaaggtgtaaatccatgtaataaatgtgaaaattgtgtt
gaagttactaacgggacatctttagatgtatatgaaatagatggagcctcaaatagaggt
attgatgagattaggcagctaagagaatctgtaaagtttttaccaacaaaatctaaatat
aaaatttacattatagatgaagttcatatgctgacggaggcggcatttaatgcactgcta
aagacattagaagaaccaccatcttatgtgatatttatttttgctacaactgatgcccat
agaataccagctaccatcctttcgcgatgtcaacgctttaatttttctaaaatacctgat
ttaaaacttattgaacatatcaggagtatattagaaagagaaaatatagagtatgaagaa
gatgcagttaatctgattgttaggaactctgatgggtgtgttagagattgtctttccctt
attgatcaagttatagcgtatactggcggtaaagttttcttggatgataccaaatattta
cttggtttatcagaagataagattattaatgaactttttgaaaagataattttaaaggat
aatgattctataaaacagctattgagtgagatagatttgaaaggcttggattataaatac
gttgttgaaaagtttcttagttttacaaagacattgttaatcctaaaacagttcaacgat
aaaaatgatgtttcattaactaacgatgaaagagtgttttttgatagattgctagattat
gtagatgatgggtatttatttgctgtccaccaagttttattaaaaatgtataatgactta
aggttttattcttttgataaagatatttttgagataggtgtttttaagcttttaaattta
gaaaagattttacccatatctgctttcagttcagataataaaatgagtgaaaataaagat
agtaagataaaaaaaatagagccacagccagttactaatctaagtgataaagataaatta
tggaaagattttattgataagttgggtgaaaaaaggccaaatatcgcttctaatctgggg
tatggatatcttatagcaatagaaaatgataagcttgtaataggtttttctgaggagaaa
gtgttccattataatataatcatgaagaatggaaatctagattatgtaaaaaaggctgct
gagcgtttttttgatggggtaaaagatgtagtaataaagctcgaaaatgggagtaaaaaa
aaaggggtgattgagaaagtaaccgagatagaaacttttaaagataaaatgctaaaaaat
gaattaaaggaaaatagtgctgttaagcttattgaaaatgaatttgatgctactataaaa
gaaattaaacttgataaatag

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Ontology (4)   
   KEGG BRITE (4)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (39)   
   KEGG ORTHOLOGY (1)   
   RefGene (36)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (17)   
   Pfam (17)   
All databases (66)   

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