KEGG   Dictyostelium discoideum (cellular slime mold): DDB_G0273003
Entry
DDB_G0273003      CDS       T00245                                 
Symbol
snrpD3
Name
(RefSeq) LSM domain-containing protein
  KO
K11088  small nuclear ribonucleoprotein D3
Organism
ddi  Dictyostelium discoideum (cellular slime mold)
Pathway
ddi03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:ddi00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    DDB_G0273003 (snrpD3)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ddi03019]
    DDB_G0273003 (snrpD3)
   03041 Spliceosome [BR:ddi03041]
    DDB_G0273003 (snrpD3)
   03032 DNA replication proteins [BR:ddi03032]
    DDB_G0273003 (snrpD3)
Messenger RNA biogenesis [BR:ddi03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    U7-dependent histone pre-mRNA processing factors
     DDB_G0273003 (snrpD3)
Spliceosome [BR:ddi03041]
 Complex A
  U1 snRNP components
   Sm proteins
    DDB_G0273003 (snrpD3)
  U2 snRNP components
    DDB_G0273003 (snrpD3)
 Complex B
  U1 snRNP components
    DDB_G0273003 (snrpD3)
  U4/U6.U5 tri-snRNP components
    DDB_G0273003 (snrpD3)
 Complex C
  U2 snRNP components
    DDB_G0273003 (snrpD3)
DNA replication proteins [BR:ddi03032]
 Eukaryotic type
  DNA Replication Termination Factors
   Telomerase complex (fungi)
    Sm core complex
     DDB_G0273003 (snrpD3)
SSDB
Motif
Pfam: LSM SM-ATX
Other DBs
NCBI-GeneID: 8618627
NCBI-ProteinID: XP_001134627
dictyBase: DDB_G0273003
UniProt: Q86L45
Position
2:2118091..2118531
AA seq 146 aa
MSIGIPVKILHEADGHIVTVELKNGELYRGTLIESEDNMNCRMKNITVTARDGRNSQMEY
CYVRGSKVRFIILPDILKNAPMFKRIDGRVVLKGKALGIGKGATFERGNFRGGRGGGGDR
GGFKGGRGGGGRGGSMNTFQQRRGPQ
NT seq 441 nt   +upstreamnt  +downstreamnt
atgagtattggtataccagttaaaattttacatgaagcagatggacatatagtaacagtg
gagttaaaaaatggtgaactttatagaggtacattaatagagagtgaagataatatgaat
tgtagaatgaagaatattacagtcacagcaagagatggcagaaactctcaaatggaatat
tgttatgttagaggtagtaaagttcgtttcatcattttaccagatatcttgaaaaatgca
ccaatgttcaagagaatcgatggtcgtgtagtacttaaaggtaaagcattaggtattggt
aaaggtgcaacctttgaacgtggtaatttcagaggtggccgtggtggtggtggtgatcgt
ggtggtttcaaaggtggtcgtggcggtggaggtcgtggtggttctatgaatactttccaa
caaagaagaggtccacaataa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (35)   
   KEGG ORTHOLOGY (1)   
   RefGene (30)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   DICTYBASE (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (2)   
   Pfam (2)   
All databases (46)   

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