KEGG   Dictyostelium discoideum (cellular slime mold): DDB_G0275407
Entry
DDB_G0275407      CDS       T00245                                 
Symbol
txnl4a
Name
(RefSeq) DIM1-like protein
  KO
K12859  U5 snRNP protein, DIM1 family
Organism
ddi  Dictyostelium discoideum (cellular slime mold)
Pathway
ddi03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:ddi00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    DDB_G0275407 (txnl4a)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:ddi03041]
    DDB_G0275407 (txnl4a)
Spliceosome [BR:ddi03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   U5 snRNP specific factors
    DDB_G0275407 (txnl4a)
SSDB
Motif
Pfam: DIM1 Thioredoxin Thioredoxin_8 DUF3192
Other DBs
NCBI-GeneID: 8619945
NCBI-ProteinID: XP_643678
dictyBase: DDB_G0275407
UniProt: Q553S5
Position
2:complement(5420626..5421449)
AA seq 142 aa
LSYLLTHLPNGWAIDQAIVTEEDRVVVIRFGHDYNPECMKQDDILASIAEKVKNMAVIYV
VDITEVPDLNSMYELYDDCPTMFFYRNKHIMVDLGTGNNNKINWALTNKQDMIDIIETVY
KGARKGKGLVNSPRDFSPQYKF
NT seq 427 nt   +upstreamnt  +downstreamnt
ttgtcatatttattaacacatcttccaaatgggtgggctattgatcaagcaattgtccac
tgaagaagatagagttgtagttatacgttttggccatgattataatccggaatgtatgaa
acaagatgatattttagcatcaattgcagagaaagttaaaaatatggctgtaatttatgt
ggttgatattacagaagtcccagatttaaattcaatgtatgagttatatgacgattgccc
aactatgtttttttatagaaataaacatattatggtcgatttaggtactggtaataataa
taaaattaattgggcactaacaaataaacaagatatgattgatatcattgagactgttta
taaaggtgctagaaaaggaaaaggtcttgttaattccccaagagatttttcaccccaata
taaattt

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (8)   
   KEGG ORTHOLOGY (1)   
   RefGene (3)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   DICTYBASE (1)   
   OC (1)   
Protein sequence (3)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (4)   
   Pfam (4)   
All databases (20)   

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