KEGG   Dictyostelium discoideum (cellular slime mold): DDB_G0277371
Entry
DDB_G0277371      CDS       T00245                                 
Symbol
pabpn1
Name
(RefSeq) polyadenylate-binding protein 2
  KO
K14396  polyadenylate-binding protein 2
Organism
ddi  Dictyostelium discoideum (cellular slime mold)
Pathway
ddi03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:ddi00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    DDB_G0277371 (pabpn1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ddi03019]
    DDB_G0277371 (pabpn1)
Messenger RNA biogenesis [BR:ddi03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Other transport factors
     DDB_G0277371 (pabpn1)
SSDB
Motif
Pfam: RRM_1 PRKG1_interact
Other DBs
NCBI-GeneID: 8620981
NCBI-ProteinID: XP_642788
dictyBase: DDB_G0277371
UniProt: Q54ZS8
Position
2:complement(7899822..7900713)
AA seq 222 aa
MTDNNNGEIVEDKDNEKLKGEDNINNHISNHNNTEETSFEDPELEEMKKRFREMEEEAKK
LTELQNNLESNITGNNGVGIGGNIGGGGGLMNTDQEEIDSRSVYVGNVDYKSTHDQILAY
FQSCGTVNRITILSDKTTGHPKGCCYVEFVNKESIINAMALNDSFFNERQLKITPKRTNL
PYYMRQGVLPPGRGGFRGGRGRGGIRGGIRGGRGRGNFYQPY
NT seq 669 nt   +upstreamnt  +downstreamnt
atgactgataataacaatggtgaaatcgttgaagacaaagataatgaaaaattaaaagga
gaagataatataaataaccatatttcaaaccacaataatacagaagaaacttcatttgaa
gatcctgaactagaggaaatgaagaaaagatttagagagatggaagaagaagcaaagaaa
ttaacagaattacaaaataatttggaatcaaatataacaggtaataatggtgttggtatt
ggtggtaatattggtggaggtggtggtttaatgaatacagatcaagaagagattgactca
agatcggtttatgtaggtaatgtggattacaaatcaactcatgatcaaattttagcatat
tttcaatcctgtggaacagtcaatcgtatcaccatcttgagtgataaaacaactggtcat
ccaaaaggatgttgttatgtcgaatttgtaaacaaagaatcaattatcaacgcaatggca
ttaaacgattcattctttaatgaacgtcaacttaaaataactccaaaaagaacaaattta
ccatactatatgagacaaggtgttttaccacctggtagaggtggttttagaggtggaaga
ggtagaggtggtattaggggtggtattagaggtggtcgtggtagaggtaacttttatcaa
ccatattaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (18)   
   KEGG ORTHOLOGY (1)   
   RefGene (13)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   DICTYBASE (1)   
   OC (1)   
Protein sequence (3)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (2)   
   Pfam (2)   
All databases (28)   

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