KEGG   Dictyostelium discoideum (cellular slime mold): DDB_G0279507
Entry
DDB_G0279507      CDS       T00245                                 
Symbol
plrg1
Name
(RefSeq) WD40 repeat-containing protein
  KO
K12862  pleiotropic regulator 1
Organism
ddi  Dictyostelium discoideum (cellular slime mold)
Pathway
ddi03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:ddi00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    DDB_G0279507 (plrg1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:ddi03041]
    DDB_G0279507 (plrg1)
   03400 DNA repair and recombination proteins [BR:ddi03400]
    DDB_G0279507 (plrg1)
Spliceosome [BR:ddi03041]
 Complex B
  Other components
   Prp19 complex
    DDB_G0279507 (plrg1)
 Complex C
   Prp19-CDC5 complex
    DDB_G0279507 (plrg1)
DNA repair and recombination proteins [BR:ddi03400]
 Eukaryotic type
  Other factors with a suspected DNA repair function
   PSO4 complex
    DDB_G0279507 (plrg1)
SSDB
Motif
Pfam: WD40 NBCH_WD40 WDR54
Other DBs
NCBI-GeneID: 8622076
NCBI-ProteinID: XP_641668
dictyBase: DDB_G0279507
UniProt: Q54WP9
Position
3:2174875..2176510
AA seq 516 aa
MVGLKDTTEENSNGESTLSQNIKQNIDRIYKSSILNTLKLYNNNNNNNNNNNNNNNTTST
TTNTNNNKTSIDDNGEDESKRIKLYSKIKDEYEPVKDLPMVAPQQRKPAATAKQTSTPTT
TSTESKPTIEEMEIDKSIDNIIKSLPKQDEKRRKIEDDKSSQITIYNKTNTDDINNRTLI
NQYEPLTYTKPEWHPPWKLMRVISGHTGWVRAIAVDKSNEWFATGSTDNTIKVWDLASGE
LKVTLTGHVSAIRGLEVSSRHPYLFSVGEDNKVLCWDLESNKQVRNYYGHRQGVYSVALH
PTLDVLFSGGRDNCVRVWDMRTRANIFEMKGHKGTILSLKSQNADPQVISGSMDTTVKLW
DLATGTSAATLTNHKKGVRSMVIHEKEYSFATGAADNIKQWKCPDGSFIKNLSGHNSIIN
AMALNADNVLVSGGDNGSISFWDWKTGYCFQKTQSIVQPGSLEGEAGIFDMAFDKTGSRL
ITCEADKTIKFYKEDEDATPYTHPVVDWKPKNNDRY
NT seq 1551 nt   +upstreamnt  +downstreamnt
atggtaggattaaaagataccactgaagaaaatagtaatggagaatctactttatcacaa
aatataaaacaaaatatagatagaatttataaatcttcaatattgaatacattaaaatta
tataataataataataataataataataataataataataataataatacaacatcaaca
accacaaatacaaataataataaaacatcaattgacgataatggtgaagatgaatcaaaa
aggataaaattatattcaaaaattaaagatgaatatgaaccagttaaagatttaccaatg
gtagcaccacaacaaagaaaacctgctgctactgctaaacaaacttcaacacctacaact
acctcaacagaatcaaaaccaactattgaagaaatggaaattgataaatcaattgataat
ataataaaaagtttaccaaaacaagatgaaaaaagaagaaaaattgaagatgataaaagt
tcacaaattacaatatataataaaacaaatacagatgatataaataatagaacattaata
aatcaatatgaaccattaacttatacaaaaccagaatggcatccaccatggaaattaatg
cgtgtaattagtggtcatacaggatgggttagagcaatagcagttgataaatctaatgaa
tggtttgcaacaggtagtacagataatactataaaggtatgggatttagcatctggtgaa
ttaaaggtaaccttgacaggtcatgttagtgccattagaggattggaggtgagttcgaga
catccttatctcttttcagtgggtgaagataataaggtgttatgttgggatttagagtcc
aacaaacaagttagaaactactatggacataggcaaggtgtttactcggttgcacttcat
ccaacattggatgtattgtttagtggtggtcgtgacaattgtgtacgtgtttgggatatg
agaaccagagcaaacatattcgaaatgaagggtcacaaaggaacaattctatctttgaaa
tctcaaaatgcagatccacaagttatctctggctcaatggataccacggtgaaactttgg
gatttagcaacgggtacaagtgctgcaactctaaccaatcataaaaaaggtgtacgttca
atggtaattcatgaaaaggagtactcattcgccactggtgccgctgataatattaaacag
tggaaatgtcctgacggttcctttataaagaatctatcgggtcataattcaatcatcaat
gctatggcattgaatgctgataatgttttggttagtggtggtgataatggttcaatcagt
ttttgggattggaaaactggttattgttttcaaaaaactcaatcaatcgttcaacctggt
tcattggaaggtgaagctggcattttcgatatggctttcgataaaactggttcaagatta
atcacttgtgaagctgataaaactattaaattttataaagaagatgaagatgcaacacct
tatactcatcctgttgttgattggaaaccaaaaaataatgatcgttattaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (51)   
   KEGG ORTHOLOGY (1)   
   RefGene (46)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   DICTYBASE (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (3)   
   Pfam (3)   
All databases (62)   

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