KEGG   Dictyostelium discoideum (cellular slime mold): DDB_G0281387
Entry
DDB_G0281387      CDS       T00245                                 
Symbol
srfA
Name
(RefSeq) MADS-box transcription factor
  KO
K12412  pheromone receptor transcription factor
Organism
ddi  Dictyostelium discoideum (cellular slime mold)
Brite
KEGG Orthology (KO) [BR:ddi00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:ddi03000]
    DDB_G0281387 (srfA)
   03021 Transcription machinery [BR:ddi03021]
    DDB_G0281387 (srfA)
Transcription factors [BR:ddi03000]
 Eukaryotic type
  beta-Scaffold factors with minor groove contacts
   MADS-box regulators of differentiation, Yeast regulators
    DDB_G0281387 (srfA)
Transcription machinery [BR:ddi03021]
 Eukaryotic type
  RNA polymerase II system
   Other transcription-related factors
    Others
     DDB_G0281387 (srfA)
SSDB
Motif
Pfam: SRF-TF
Other DBs
NCBI-GeneID: 8623058
NCBI-ProteinID: XP_640674
dictyBase: DDB_G0281387
UniProt: Q54TY7
Position
3:4494019..4495275
AA seq 418 aa
MSLSTVSNHIINPLGNVVYGNPSSPTSTSSSSSLTPTSTNEEMIKKEDSGTSEPSSPSTG
ECNGKKAGRRKIKIEFIDDKSRRHITFSKRKAGIMKKAYELSTLTGTQVLLLVASETGHV
YTFATAKLQPLITRPEGKNLIQSCLNTPDNPNSPSMANQNSNNNSNLLQQQQQQQLQQQQ
QLQQQQQQQQQQQQQQQQQQQQQQAAQQAVQQQQQQQAAQQQAAQQQQLQLQQQQQQQQQ
QQQQQQQQQQQQQLQQLQQQQLLQQQQHQQIQQHQQQQQYINSNGYPETIYDIQDKDIER
RLGKDNNNNNNNNNNNINNNNNNNNSNNNSGNNNSNNNNNNNNKNNSNNNSQYIQQQNLN
IDLNYSNPNVYPIGNYFQQTVQSRYIQSSSSASSSPASPNQFNYSNHSMPLNNQFPPC
NT seq 1257 nt   +upstreamnt  +downstreamnt
atgagcttatcaacagtatcaaaccatataataaatccattaggaaatgttgtttatggt
aatccatcatcaccaacatcaacttcatcatcatcatccctaacaccaacatcaaccaac
gaagaaatgataaagaaagaagatagtggtacaagtgaaccatcatcaccttctacaggt
gagtgtaacggtaaaaaagctggtagaagaaaaattaaaatagagttcatcgatgataaa
tccagaagacatattaccttttccaaaagaaaagctggtatcatgaagaaagcatacgag
ctatcaactcttaccggtactcaagtcttattattagttgcctccgaaactggtcatgta
tatacatttgcaactgctaaattacaaccattaatcactagaccagaaggtaaaaacctc
attcaatcttgcttaaatactcctgataatccaaattcaccttcaatggcaaatcaaaat
agtaataataattcaaatttattacaacaacaacaacaacaacaattacaacaacaacaa
caattacaacaacaacaacaacaacaacaacaacaacaacaacaacaacaacaacaacaa
caacaacaacaagctgctcaacaagctgtccaacaacaacaacaacaacaagccgctcaa
caacaagccgctcaacaacaacaattacaattacaacaacaacaacaacaacaacaacaa
caacaacaacaacaacaacaacaacaacaacaacaacaattacaacaattacaacaacaa
caattattacaacaacaacaacaccaacaaatacaacaacatcaacaacaacaacaatat
ataaattcaaatggatatcctgaaacaatttacgacattcaagataaagatattgaaaga
agattaggaaaagataataataataataataataataataataataatattaataataat
aataataataacaatagtaataataatagtggtaataataatagcaataataataataat
aataataataaaaataattcaaataataattcacaatatattcaacaacaaaatttaaat
attgacttaaactatagtaacccaaatgtttatccaattggtaattatttccaacaaacc
gttcaatcaagatatattcaaagtagtagcagtgcctcttcctcaccagcttctccaaac
caatttaattattcaaatcattcaatgccattaaataatcaatttccaccatgctaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (50)   
   KEGG ORTHOLOGY (1)   
   RefGene (45)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   DICTYBASE (1)   
   OC (1)   
Protein sequence (3)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (1)   
   Pfam (1)   
All databases (59)   

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