KEGG   Dictyostelium discoideum (cellular slime mold): DDB_G0281621
Entry
DDB_G0281621      CDS       T00245                                 
Name
(RefSeq) SART-1 family protein
  KO
K11984  U4/U6.U5 tri-snRNP-associated protein 1
Organism
ddi  Dictyostelium discoideum (cellular slime mold)
Pathway
ddi03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:ddi00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    DDB_G0281621
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:ddi03041]
    DDB_G0281621
   04121 Ubiquitin system [BR:ddi04121]
    DDB_G0281621
Spliceosome [BR:ddi03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   U4/U6.U5 tri-snRNP specific factors
    DDB_G0281621
 Complex C
   U4/U6.U5 tri-SnRNP specific factors
    DDB_G0281621
Ubiquitin system [BR:ddi04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    DDB_G0281621
SSDB
Motif
Pfam: SART-1 HIND
Other DBs
NCBI-GeneID: 8623149
NCBI-ProteinID: XP_640539
dictyBase: DDB_G0281621
UniProt: Q54TQ2
Position
3:complement(4716452..4718620)
AA seq 688 aa
MSETTPTNVITSLSIEETNRIRISLGLKPLKEESKEVKPQTTTNNNNNNNNTNSDTLEVL
DTINRLKKKRELNSKLAGKSIAEQLLEGENEDEDDDISSWINKSRLNEKQKQIERKKELL
NKKQQKQQQHYNQSNLKGMKVGNDIKYFEDENEHILTLQDSSVLEDSEDVLINVNLTEKE
KREKQLQSNKKKSKFDRYDDFGEHKGGILSDYSDDDGDVVDNGFILGNDGKFDKDSSSIG
QNGLSLKDQAKKNLESYNMEDNTTTSILSSFYTQEEMERFKKNRQSSSTTTKTGSSTAAT
ATKGDKNKKKKLRKKSATRDLLNELDATTSSDLGSRSSKSVITEKEKKEIEEQSKREENY
QRAKDKANEISKQTFSSDYYEEAEDEDFYKSLATAKKAPIFQKEKSIVDKIVNNKKKQDE
SLDHQNSTTNNLEEITINPTSEFVRSLNPEGLISNYRLTTTTTTTTTNNNKIDDNTVTSL
SNENNNNNNDSDDNNNNSNNNNKDEEMKNIDDGDDDDDENEEDEDYNKYKEKEKKYNNLS
AILPEEPLVSGSVSAALRLFAQKGDLQPNPVTNNRKRGINYDNDESTVIEHKDEFGRVMS
RKEAFVKMSQVFHGKKSGKNKMEKRKRLYEEELKKMKMDSNDTPLGMVKSFQSYQEKTNS
PYLVLSGGGGAANILKQNINNNQTTNKK
NT seq 2067 nt   +upstreamnt  +downstreamnt
atgagtgaaacaacaccaacaaatgttattacaagtttatcaattgaagaaacgaatagg
atcagaatttcattaggtttaaaaccattaaaagaagagtcaaaagaagtaaaaccacaa
acaacaacaaataataataataataataataatacaaatagtgatactttagaagtattg
gatacaattaatagattaaaaaaaaaaagagaattaaattcaaaattagcaggtaaatct
atagctgaacaattattagaaggtgaaaatgaagatgaagatgatgatatatcaagttgg
ataaataaatcaagactaaatgaaaaacaaaaacaaattgaaagaaagaaagaattatta
aataaaaaacaacaaaaacaacaacaacattataatcaaagtaatttaaagggtatgaaa
gttggtaatgatattaaatattttgaagatgaaaatgaacatattttaactttacaagat
tcaagtgtattagaagattctgaggatgtattgataaatgttaatttaacagagaaagaa
aaaagagagaaacaattacaatcaaataaaaagaaatcaaaatttgatagatatgatgat
tttggtgaacataaaggtggaattttaagtgactatagtgatgatgatggtgatgttgtt
gataatggtttcattttaggtaatgatggtaaattcgataaagattcatcatccataggt
caaaatggactatcattaaaagatcaagctaaaaagaatttagaatcttataatatggaa
gataatacaactacaagtatattatcctcattctatactcaagaagagatggaaagattt
aaaaagaatcgtcaatcatcatcaacaacaacaaagactggtagttcaacagcagcaaca
gcaacaaaaggagataaaaataagaaaaagaaattaagaaagaaatcagcaacaagagat
ttacttaatgaattggatgctactacaagtagtgatttaggttcaagaagttcaaaatca
gtcatcactgaaaaggagaaaaaagaaattgaagaacaaagcaaaagagaagaaaattat
caaagagcaaaagataaagcaaatgaaatttcaaaacaaacttttagttcagattattat
gaagaagctgaagatgaagatttttataaaagtttagcaaccgccaaaaaagcaccaatc
tttcaaaaagagaaaagtatagttgataaaattgtaaataataaaaagaaacaagatgaa
tcattagatcatcaaaatagtactactaataatttagaagaaattacaattaatccaact
tctgaatttgtaagatctttaaatcctgaaggtttaatttcaaattatagattaacaaca
acaacaacaacaactacaacaaataataataaaattgatgataatacagtaacttcatta
tcaaatgaaaataataataataataatgatagtgatgataataataataatagtaataat
aataataaagatgaagaaatgaaaaatattgacgatggcgatgatgatgatgacgaaaat
gaagaagatgaagattataataaatataaagaaaaagaaaagaaatataataatttatca
gcaatattaccagaggaaccattagtatcaggtagtgtttcagcagcattaagattattt
gcacaaaaaggtgatttacaaccaaatccagttacaaacaataggaaaagaggtattaat
tatgataatgatgaatctactgtaattgaacataaagatgaatttggtagagttatgagt
agaaaagaagcatttgtaaagatgtctcaagtatttcatggtaaaaaatctggtaaaaat
aaaatggagaaaagaaaaagactctatgaggaggaattaaagaaaatgaaaatggattca
aacgatactccattaggtatggttaaatcattccaatcctatcaagagaaaacaaattca
ccatatttagttttatcaggtggtggtggtgctgcaaatattttaaaacaaaatattaat
aataatcaaactacaaataaaaaataa

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (46)   
   KEGG ORTHOLOGY (1)   
   RefGene (41)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   DICTYBASE (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (2)   
   Pfam (2)   
All databases (56)   

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