KEGG   Dictyostelium discoideum (cellular slime mold): DDB_G0287337
Entry
DDB_G0287337      CDS       T00245                                 
Symbol
taf5
Name
(RefSeq) TFIID subunit
  KO
K03130  transcription initiation factor TFIID subunit 5
Organism
ddi  Dictyostelium discoideum (cellular slime mold)
Pathway
ddi03022  Basal transcription factors
Brite
KEGG Orthology (KO) [BR:ddi00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    DDB_G0287337 (taf5)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:ddi03021]
    DDB_G0287337 (taf5)
   03036 Chromosome and associated proteins [BR:ddi03036]
    DDB_G0287337 (taf5)
Transcription machinery [BR:ddi03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIID
     DDB_G0287337 (taf5)
   Coactivators
    SAGA/TFTC/STAGA complex
     DDB_G0287337 (taf5)
Chromosome and associated proteins [BR:ddi03036]
 Eukaryotic type
  Histone modification proteins
   HAT complexes
    PCAF complex
     DDB_G0287337 (taf5)
    STAGA complex
     DDB_G0287337 (taf5)
    TFTC complex
     DDB_G0287337 (taf5)
    SAGA complex
     DDB_G0287337 (taf5)
    SLIK complex
     DDB_G0287337 (taf5)
SSDB
Motif
Pfam: WD40_Prp19 WD40 Beta-prop_WDR5 Beta-prop_THOC3 Beta-prop_WDR3_1st TFIID_NTD2 Beta-prop_CAF1B_HIR1 WD40_WDHD1_1st Beta-prop_WDR3_2nd WD40_Gbeta WD40_CDC20-Fz Beta-prop_WDR36-Utp21_2nd Beta-prop_EML_2 Beta-prop_TEP1_2nd EIF3I WD40_MABP1-WDR62_2nd WDR55 Beta-prop_WDR90_POC16_2nd NBCH_WD40 Beta-prop_WDR36-Utp21_1st WD40_MABP1-WDR62_1st Beta-prop_Aladin Beta-prop_TEP1_C Beta-prop_EML WDR90_beta-prop_4th ANAPC4_WD40 Beta-prop_IFT122_1st Beta-prop_RIG_2nd Beta-prop_WDR41 Beta-prop_WDR19_1st Beta-prop_SCAP Beta-prop_WDR75_1st Beta-prop_IFT140_1st RMC1_N Beta-prop_DCAF4 Beta-prop_HPS5 WD40_RFWD3 Ge1_WD40 Beta-prop_Vps41 Tricorn_2nd Beta-prop_SPT8 Beta-prop_WDR35_TULP_N eIF2A Beta-prop_DCAF12 WD_LRWD1 VPS8_N LisH ELYS-bb WDR54
Other DBs
NCBI-GeneID: 8626077
NCBI-ProteinID: XP_637246
dictyBase: DDB_G0287337
UniProt: Q54KH7
Position
5:<150447..>153588
AA seq 948 aa
MSTPPQQPNQSQPTQSPPIITTPQTTTTTISSPIAQTTIPASGVGSSSANAVTSTPSPTT
TTSTAPSTPTPTPTPTPNPNTTSSISTSTPTPTTTTTTILTPPLPQNTTTPITAVPSSAS
AIPITATTTISPNTSSNITALPTTPTTPNITPTTTAATTTTTTTPTTSSSSSTTNAPTSN
EVKSAQTKDKYDLAVLNYLRKKGYTNAEAILKQEIFNSSQSMSSPISPSDDEATNTTTTN
QTNINTVTDNLGSSDDQELAQYLHMYNSSNKGDTSNPQNYLEQYKKLGNWIHSSLDIYKN
ELLSILYPVFVHSYIDLITKGYPQQARELMEKIGPDHEEYFGDDLKLLRGISNTDHLKEN
ELVDLFRNNRWNIKMCAYSFELLMSFLHQSNFILLLGLINQYIHINVSNLRPGFIDDEQY
SISFQSEKDAGDLNSTPINYHAFKPEFEDDVLVQQKEKQQLEQGRILPLTDPNAPLPPVV
APPPPPPPTSGYIPKLKKKDKKKKEVKDERMSKIESNVPIPNLTERFENELMEDFTKCVS
LSSSHLPSICFYTIFNTYQGLNTTDISKDAQLVAGGFSDSSVKIWNLKEMKEQRLQQQQQ
QQQQQQQQQNSNQNGYFENGNFASSASSASSAMNGSGNNNENNKSTTANNNLNSGSSSSS
NKLQKQQKESEFKTFLGHSGPVYGCSFSPDSQYLLSCSEDTTARLWSMETMSNLVCYKGH
NFPVWDVSFSPFGFYFATASHDRTARLWTTNHISPLRIFTGHLSDCNTVRFHPNINYLAT
GSNDKSARLWEIQTGKCVRIFMGHRAPIYTVAFSPDGRLLATAGEDTSVILWDLSTGKKV
KKMDGHTKCVYSLDFSCDGSILASGSSDCTVRLWDVKKAFNSSLSTQPSSLINDESRKRK
TLKSKLFSDELLETYPTKQTPVYNVCFSRRNLLLASGAFNTLTAFDKF
NT seq 2847 nt   +upstreamnt  +downstreamnt
atgtcaactccacctcaacaaccaaaccaatcacaaccaactcaatcaccaccaataata
acaacaccacaaacaactacaactacaatatcatcacctatagcacaaaccactatacct
gctagtggtgttggatcatcaagtgcaaatgcagtaacatcaactccatcaccaacaact
acaacttctacagcgccatctacaccaaccccaacaccaacaccaacaccaaacccaaat
acaacatcatcaatatcaacatcaactccaactccaactacaacaacaacaacaatttta
acaccaccacttcctcaaaatactacaacaccaattacagcagttccatcatcagcatca
gcaataccaattacagcaacaacaacaatatccccaaatacatcatcaaatataacagca
ttaccaacaacacctacaacaccaaacataacacctacaacaacagcagcaacaacaact
actacaacaacaccaacaacatcatcgtcatcatcaactacaaacgcgccaacatcaaat
gaagtaaaatcagcacaaacaaaagataaatatgatttagcggtacttaattatttaaga
aaaaaaggatacacaaatgcagaggcaatattaaaacaagaaatatttaattcaagtcaa
tcaatgtcatcaccaatatcaccatcagacgatgaagcaaccaataccaccactaccaat
caaaccaatattaatacagttacagataatttaggatcatcagatgatcaagaattagca
caatatcttcatatgtataatagtagcaataaaggtgatacatctaatcctcaaaactat
ttagaacaatataaaaaacttggtaattggattcacagttctttagatatctataagaat
gaattactctcaatcttatatccagtatttgttcattcatatatcgatttaatcacaaaa
ggttatccacaacaagctagagaattaatggaaaaaattggtcctgatcatgaagaatat
tttggtgatgatttaaaattattaagaggtattagtaatactgatcatttaaaagaaaat
gaattagttgatttatttagaaataatagatggaatattaaaatgtgtgcatattcattt
gaattgttaatgtcatttttacatcaaagtaatttcatattattattaggattaattaat
caatatattcatatcaatgtaagtaatcttagacctggtttcattgatgatgaacaatat
tcaatatcatttcaatcagagaaagatgctggtgatttaaattcaacaccaatcaattat
catgcatttaaaccagaatttgaggatgacgtattagtacaacaaaaagagaaacaacaa
ttggaacaaggtagaatcttaccattaactgatccaaatgcaccattaccacctgttgtt
gctccaccaccacctccaccaccaacttctggttatattccaaaattaaagaaaaaagat
aaaaaaaaaaaagaagttaaagacgaaagaatgtcaaaaattgaatcaaatgtaccaatt
ccaaatttaactgaaagatttgaaaatgaattaatggaagattttacaaaatgtgtttca
ttatcatctagtcatttaccatcaatttgtttttatacaatttttaatacttatcaagga
ttaaatacaacagatatttcaaaggatgcacaattagttgcaggtggttttagtgatagt
tctgtaaagatttggaatttaaaagaaatgaaagaacaaagattacaacagcaacagcaa
caacaacaacaacagcaacaacaacaaaattcaaatcaaaatggttattttgaaaatggt
aattttgcatcatcagcatcatcagcatcatcagcaatgaatggtagtggtaataataat
gaaaataataaatcaacaactgcaaataataatttaaatagtggtagtagtagtagtagt
aacaaattacaaaaacaacaaaaagaatcagaatttaaaacatttttaggtcattctgga
ccagtttatggttgttcattctcaccagattcacaatatttattatcatgttcagaggat
acaacagcaagattatggagtatggaaacaatgagtaatttagtttgttataaaggtcat
aatttcccagtttgggatgtatcttttagtccatttggtttctatttcgcaacagcatct
catgatcgtactgcaagattatggacaaccaatcatatatcaccattacgtattttcact
ggtcacctttcagattgtaatacagtacgttttcatccaaatatcaattacttagccact
ggtagcaatgataaatctgcacgtctttgggagattcaaaccggtaaatgtgtgcgtatt
ttcatgggtcatcgtgccccaatttacactgttgccttctcgccagatggtagattatta
gcaaccgctggtgaggatacaagtgttatcctttgggatttatcgacaggtaaaaaggtt
aaaaaaatggatggtcatacaaaatgtgtttactctttggatttcagctgtgatggtagt
atacttgctagtggttcctctgattgtacagtacgtttatgggatgttaaaaaagctttc
aatagttccctctcaactcaaccatcatcattaattaatgatgaatctagaaaaagaaaa
acacttaaatcaaaattattctctgatgaacttttggaaacttatccaacaaaacaaact
ccagtttataatgtttgtttctcaagaagaaacttattattagcttctggtgcttttaat
actttaactgcttttgataaattttaa

  All links  
Gene (99)   
   RefGene (95)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   DICTYBASE (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (49)   
   Pfam (49)   
All databases (151)   

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