KEGG   Dictyostelium discoideum (cellular slime mold): DDB_G0287361
Entry
DDB_G0287361      CDS       T00245                                 
Symbol
ddx41
Name
(RefSeq) DEAD box protein abstrakt
  KO
K13116  ATP-dependent RNA helicase DDX41 [EC:5.6.2.7]
Organism
ddi  Dictyostelium discoideum (cellular slime mold)
Brite
KEGG Orthology (KO) [BR:ddi00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:ddi03041]
    DDB_G0287361 (ddx41)
Enzymes [BR:ddi01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.7  DEAD-box RNA helicase
     DDB_G0287361 (ddx41)
Spliceosome [BR:ddi03041]
 Complex C
  Other components
   Complex C specific factors
    DDB_G0287361 (ddx41)
SSDB
Motif
Pfam: DEAD Helicase_C New_glue Cas3-like_C_2
Other DBs
NCBI-GeneID: 8626092
NCBI-ProteinID: XP_637262
dictyBase: DDB_G0287361
UniProt: Q54KG1
Position
5:complement(<183547..>185657)
AA seq 671 aa
MSEESRKHDIEEQHIEKWIPLKERKLNQIKSKLNNLKQQQPQQHSQQQENEQNNATATNT
NITNTTTTTTTTTTTTTSSNNDNNFEDEKKPIYQQSQSLLDQKFEMIKKQENKTQRELQQ
GGTIIENDVNSSNNNNNNGEENKIKEEKRLDMEESDILKSLKTFKPLVSVKDRAKDVIYT
DSIKTNWRAPRYILERDEKDHQKVRDQLNIITDGEDIPPPITTFKEMKIPKPVIDVLLEK
GIKKPSPIQVQGLPVILSGRDMIGIAYTGSGKTLVFTLPMVLFALEEECKLPIIQGEGPF
GLILCPSRELARQTYDLVNSFTNALHKNGGHPQLRTLLAIGGIDLREQEHIFKKGVHMII
ATPGRLLDLLNKKKINFKLCKYLGLDEADRLIDLGFEDDIRSVLDNFTNQRQTLLFSATM
PKKIQEFARSALVLPVEVNVGRAGAANLNVTQEVEFVKPEAKIVYLLECLQKTPPPVLIF
CENKKDVDDIYEYLLLKQVEAVSIHGDKSQDERESAIKAFREGKKDVLVATDVASKGLDF
PEIQHVINFDMPREIENYIHRIGRTGRRGNKGVATTFINKNNTESLLLDLKYLLIEAKQK
VPPALLEIPDDNQYLQKLQDRNGNTGGGADDDDTKPCEYCDGRGHRLVNCPKLKKQAGPK
RDFFGSGGGDW
NT seq 2016 nt   +upstreamnt  +downstreamnt
atgtcagaagaatcacgtaaacatgatatagaggaacaacatattgaaaaatggatacct
ttaaaagaaaggaaattaaatcaaattaaatcaaaattaaataatttaaaacaacaacaa
ccacaacaacactcacaacaacaagagaatgaacaaaataatgcgactgcaacaaataca
aatataacaaatacaacaacaacaacaacaacaactacaacaactactacatcaagcaat
aatgataataattttgaagatgaaaagaaaccaatttatcaacaatcacaaagtttatta
gatcaaaaatttgaaatgattaaaaaacaagagaataaaacacaaagagaattacaacaa
ggtggtacaataattgaaaatgatgtaaatagtagcaataataataataataatggtgaa
gagaataaaattaaagaagagaaaagattagatatggaagagagtgatatattgaaatca
ttaaaaacttttaaaccattggtatcggttaaagatcgtgcaaaggatgtaatttacact
gactcgattaagaccaattggagagcaccacgttatatattggaaagagatgaaaaggat
catcaaaaggttagagatcaattaaatatcattacagatggtgaagatataccaccacca
attactacttttaaagagatgaaaatacccaaaccagtgattgacgtgctcttggagaag
ggtataaagaagccctcccccatccaagtccaaggtttacccgttattttatcaggtcgt
gatatgattggtatcgcatacactggtagtggtaagacactggtgttcacattgccaatg
gtattgtttgcattggaggaagagtgcaaactaccaataattcaaggtgaaggaccgttt
ggtttaattctttgcccatcaagagaattggcaagacaaacatacgatttggttaactca
ttcacaaatgcattacacaagaatggtggtcatccacaacttagaacactattagcaatt
ggtggtatcgatttacgtgaacaagaacatatctttaagaaaggtgttcatatgatcatt
gcaacacctggtcgtttattagatctattaaataaaaagaaaatcaatttcaaactttgt
aaatatcttggtttagatgaagctgatagattaattgatttaggttttgaggatgatatt
cgttcagttttagataatttcacaaatcaaagacaaactctactctttagtgcaactatg
ccaaagaaaattcaagaatttgctagaagtgctctagttttaccagttgaagttaatgtt
ggtagagctggtgctgcaaatttaaatgttactcaagaagttgaatttgttaaacctgaa
gctaaaatcgtttatttattagaatgtttacaaaaaacaccaccacctgtattaatattt
tgtgaaaataaaaaagatgttgatgatatttatgaatatttattattgaaacaagttgaa
gcagtttcaatacatggtgataaatcacaagatgaaagagaatcagcaattaaagcattt
agagagggtaaaaaggatgttttggttgcaacagatgttgcatctaaaggtttagatttt
ccagagattcaacatgtcatcaatttcgatatgccaagagagattgaaaattatattcac
agaattggtagaactggtcgtcgtggtaataaaggtgttgcaactacatttatcaataag
aataatactgaatctttattattggatcttaaatacctattaattgaagctaaacaaaaa
gtaccacctgcactacttgaaataccagatgataatcaataccttcaaaaacttcaagat
cgtaatggaaatactggtggtggtgctgatgatgatgatactaaaccttgtgaatattgt
gatggtcgtggtcatagattagttaattgtccaaaattgaaaaaacaagctggtccaaaa
agagactttttcggttctggtggtggtgattggtaa

  All links  
Gene (25)   
   RefGene (21)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   DICTYBASE (1)   
   OC (1)   
Protein sequence (3)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (7)   
   Pfam (7)   
All databases (36)   

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