KEGG   Dictyostelium discoideum (cellular slime mold): DDB_G0287993
Entry
DDB_G0287993      CDS       T00245                                 
Symbol
vps60
Name
(RefSeq) SNF7 family protein
  KO
K12198  charged multivesicular body protein 5
Organism
ddi  Dictyostelium discoideum (cellular slime mold)
Pathway
ddi04144  Endocytosis
Brite
KEGG Orthology (KO) [BR:ddi00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    DDB_G0287993 (vps60)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:ddi04131]
    DDB_G0287993 (vps60)
Membrane trafficking [BR:ddi04131]
 Endosome - Lysosome transport
  Endosomal sorting complexes required for transport (ESCRT)
   ESCRT-III complex
    DDB_G0287993 (vps60)
SSDB
Motif
Pfam: Snf7 Phage_lysozyme DUF4665 DUF6119 DUF285 Hydantoinase_B Pup
Other DBs
NCBI-GeneID: 8626402
NCBI-ProteinID: XP_636927
dictyBase: DDB_G0287993
UniProt: Q54JK4
Position
5:complement(940480..941265)
AA seq 215 aa
MKRFFGVSNNQPAPTLDEATKRIGGRMGQMDEKINGLNQELLAYDKQIKATRPGPAQNAI
KQKAIRVLQQKKMYERQRDQMASTSFNMEQTKFATESMRDTITTVSAMKQGAKDMKTQLK
HIKIEDVDDMQDEMQDLLDYNNEIQESLGRAYQTPDTLDESELEAELMSMGEELELEASM
PSYLMTPSVPTTDPHQSSVDEYGLPIGQEASQQVV
NT seq 648 nt   +upstreamnt  +downstreamnt
atgaaaagattttttggtgtttcaaacaaccaaccagccccaactttagatgaggcaaca
aaaagaattggtggaaggatgggacaaatggatgaaaaaataaatggattaaatcaagaa
ttattagcatatgataaacaaataaaagcaactagaccaggtccagcacagaatgcaatt
aaacaaaaagcaattagagtattacaacaaaagaaaatgtatgaaagacaaagagaccaa
atggcaagtacatcatttaatatggagcaaaccaagtttgccacagagtcaatgagagat
acaattacaacagtttcagcaatgaaacagggtgccaaagacatgaaaacacaattaaaa
catataaaaattgaagatgtagacgatatgcaagatgaaatgcaagatttattagattat
aacaatgaaattcaagaatcattaggtagagcttatcaaactccagatactttagatgaa
tcagagttggaggctgaattaatgtcaatgggtgaagaattagaattggaagcctcaatg
ccttcttatttaatgacaccatcagttccaactactgatccacatcaatcaagtgttgat
gaatatggtttacctataggccaagaagcatcacaacaagttgtttaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (17)   
   KEGG ORTHOLOGY (1)   
   RefGene (12)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   DICTYBASE (1)   
   OC (1)   
Protein sequence (3)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (7)   
   Pfam (7)   
All databases (32)   

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