KEGG   Dictyostelium discoideum (cellular slime mold): DDB_G0288613
Entry
DDB_G0288613      CDS       T00245                                 
Symbol
erf1
Name
(RefSeq) eukaryotic petide chain release factor subunit 1
  KO
K03265  peptide chain release factor subunit 1
Organism
ddi  Dictyostelium discoideum (cellular slime mold)
Pathway
ddi03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:ddi00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    DDB_G0288613 (erf1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ddi03019]
    DDB_G0288613 (erf1)
   03012 Translation factors [BR:ddi03012]
    DDB_G0288613 (erf1)
Messenger RNA biogenesis [BR:ddi03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Surveillance factors
    Surveillance complex
     DDB_G0288613 (erf1)
Translation factors [BR:ddi03012]
 Eukaryotic type
  Release factors
   DDB_G0288613 (erf1)
SSDB
Motif
Pfam: eRF1_2 eRF1_3 eRF1_1 baeRF_family10 acVLRF1 Ribosomal_L7Ae Sec5
Other DBs
NCBI-GeneID: 8626719
NCBI-ProteinID: XP_636638
dictyBase: DDB_G0288613
UniProt: Q9BMX0
Position
5:complement(1753244..1754781)
AA seq 441 aa
MSAVDDQQNADKQVEQWKIKKLIKNLEAARGNGTSMISLIIRPGDQIAKVNKMLAEEYGT
ASNIKSRVNRLSVLGAITSAQQRLKLYTKVPDNGLVIYCGTMVTDEGKEKPVRIDIEPFK
PINTSLYLCDNKFHTAPLGELLESDEKFGFIVVDGNGALFGLLCGSTRTVLHKITVDLPK
KHGRGGQSALRFARLRMEKRHNYVRKVSELATQFYVTNDKPNVSGLILAGSADFKTELGT
SDMFDQRLREKIIKIVDVSYGGDNGFNQAIELSGEVLSSVKFIQEKKLISQFFEEIAQDT
GKYCFGIADTLKALDLGAAHTLIVWESLETIRYLLRLPTGEEKVIFLNKDQNKDASVFKD
KESGLDYEIVEEMPIVEWFANNYKNFGASLEFVTNKSQEGSQFCKGFGGLGGLLRYQVDF
AQLNDFDNPDENEYDDSDSDF
NT seq 1326 nt   +upstreamnt  +downstreamnt
atgtcagctgttgatgatcaacaaaatgcagataagcaagttgaacaatggaaaatcaaa
aaattaattaaaaatttggaagctgccagaggtaatggtacatctatgatttcattaatt
attcgtccaggtgatcaaattgcaaaagttaataaaatgttagcagaagagtatggtaca
gcatcaaatattaaatcaagagttaatagattatcagtattgggtgcaattacatcagca
caacaaagattaaagttatatactaaagtaccagataatggtttagttatttattgcggt
acaatggttacagatgaaggtaaagagaaaccagtacgtatcgatattgaaccattcaaa
ccaatcaatacctcactctatttatgtgataataaattccatacagcaccattgggtgaa
ttattagagagtgatgaaaagtttggtttcatcgtcgtagatggtaatggtgcactcttt
ggtttattatgtggttcaaccagaacagttctccataagattacagtagatctcccaaag
aaacacggtcgtggtggtcaatctgcccttcgtttcgctcgtcttcgtatggaaaaacgt
cacaattacgttcgtaaagtttcagagttggccacccaattctacgtcaccaatgataaa
ccaaacgtttcaggtttgattttagctggttctgccgatttcaagactgaacttggtacc
tctgatatgtttgatcaacgtcttcgtgaaaagatcattaaaatcgtcgatgtttcctat
ggtggtgataatggtttcaatcaagctatcgaattatctggtgaagttctctcaagtgtc
aaattcattcaagagaagaaattaatctcacaattctttgaagagatcgcacaagacact
ggtaagtattgtttcggtatcgctgatactttgaaagctttggacttgggtgctgctcac
actttaatcgtttgggaatcattggaaacaattcgttacttacttcgtttaccaactggt
gaagagaaagtcatctttttaaataaagatcaaaataaagatgcctctgtctttaaggat
aaagaatctggtcttgactatgaaatcgtcgaagaaatgccaatcgttgagtggttcgcc
aataactacaaaaactttggtgcctctctcgaattcgtcaccaacaaatctcaagaaggt
tcacaattctgtaaaggttttggtggtttgggtggtttactccgttatcaagtagatttc
gctcaactcaatgatttcgataatccagatgagaatgaatacgatgatagtgattcagac
ttttga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (65)   
   KEGG ORTHOLOGY (1)   
   RefGene (60)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   DICTYBASE (1)   
   OC (1)   
Protein sequence (3)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (7)   
   Pfam (7)   
All databases (81)   

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