KEGG T05141: DDI

Dickeya dianthicola: DDI_1810

Entry

DDI_1810          CDS       T05141

Name

(GenBank) Arginyl-tRNA synthetase

K01887

arginyl-tRNA synthetase [EC:6.1.1.19]

Organism

ddq Dickeya dianthicola

Pathway

ddq00970

Aminoacyl-tRNA biosynthesis

Brite

KEGG Orthology (KO) [BR:ddq00001]
09120 Genetic Information Processing
  09122 Translation
   00970 Aminoacyl-tRNA biosynthesis
    DDI_1810
09180 Brite Hierarchies
  09181 Protein families: metabolism
   01007 Amino acid related enzymes [BR:ddq01007]
    DDI_1810
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:ddq03016]
    DDI_1810
   03029 Mitochondrial biogenesis [BR:ddq03029]
    DDI_1810
Enzymes [BR:ddq01000]
6. Ligases
  6.1  Forming carbon-oxygen bonds
   6.1.1  Ligases forming aminoacyl-tRNA and related compounds
    6.1.1.19  arginine---tRNA ligase
     DDI_1810
Amino acid related enzymes [BR:ddq01007]
Aminoacyl-tRNA synthetase
  Class I (G)
   DDI_1810
Transfer RNA biogenesis [BR:ddq03016]
Eukaryotic type
  Aminoacyl-tRNA synthetases (AARSs)
   Multi-aminoacyl-tRNA synthetase complex (MSC)
    DDI_1810
Prokaryotic type
   Other AARSs
    DDI_1810
Mitochondrial biogenesis [BR:ddq03029]
Mitochondrial DNA transcription, translation, and replication factors
  Mitochondrial transcription and translation factors
   Other mitochondrial DNA transcription and translation factors
    DDI_1810

SSDB

Motif

Pfam:

tRNA-synt_1d DALR_1 Arg_tRNA_synt_N tRNA-synt_1e tRNA-synt_1g HTH_8 ADP_ribosyl_GH

Other DBs

NCBI-ProteinID:

ATO32978

Position

complement(1838506..1840236)

AA seq 576 aa
MNIQALLSEKVHQAMIAAGASADSEAMVRQSAKAQFGDYQANGIMAAAKRLGLPPRQLAE
KVVQTLRLDGIAAKTEIAGPGFINIFLDSQWLSAQLEHALTAPKLGVRAVEPQTIVVDYS
APNVAKEMHVGNLRSTIIGDAAVRTLEFLGHNVIRANHVGDWGTQFGMLIAHLEDVQNDH
SSDLELADLEAFYREAKKHYDDDAAFAERARGYVVKLQSGDEYCRSMWRKLVDITMVQNQ
HSYDRLNVSLTQNDVMGESLYNAMLPEIVADLKAKGLAVESEGATVVYLDEYKNKEGEAM
GVIIQKKDGGYLYTTTDIACAKYRYEKLGANRVLYYIDSRQHQHLMQAWSIVRKAGYVPE
SVSLEHHMFGMMLGKDGKPFKTRAGGTIKLSELLDEAYERALALIAGKNPEMARGEREQL
AQVVSIGAVKYADLSKNRTTDYIFDWDNMLAFEGNTAPYMQYAYTRVSSIFKRAGVEEAG
LTQPIALTAEHEHALATRLLQFEEVVTTVARDGTPHVMCAYLYDLAGLFSGFYENCPILN
ADSDGVRQSRLKLALLTAKTLKTGLDTLGIQTVEKM

NT seq 1731 nt +upstreamnt +downstreamnt
gtgaatattcaggctcttctttcagaaaaagtccatcaggcaatgattgcggcgggcgcg
tccgcagacagcgaagcaatggttcgccagtcagcaaaagcgcaatttggtgattatcag
gcaaatggcatcatggcggccgccaaaagactgggcctgcccccgcgccagcttgccgag
aaagtagtacaaacgctgcggctggatggcattgcagccaaaacggagattgccggtccc
ggtttcatcaatatttttctcgactcccagtggctatccgcccagttggaacacgcgctg
accgccccgaagctgggcgtccgtgccgttgagccgcaaactatcgtcgttgactattcg
gctcccaacgtggctaaagagatgcacgtcggcaacctgcgctccaccatcattggcgat
gccgccgtacgtaccctggaattcctcggccacaacgttattcgcgccaaccacgtcggc
gactggggcacccagttcggtatgctgattgctcatctggaagatgtgcaaaacgaccat
tccagcgatctggaactggcggatctggaagcgttctaccgtgaagcgaaaaaacattac
gatgacgatgccgccttcgccgagcgcgcccgcggctacgtagtaaaactgcaaagcggc
gacgaatattgccgttcaatgtggcgcaagctggtggatatcactatggtccagaaccag
cacagctatgaccgcctgaacgtgtcgctgacccaaaatgacgtcatgggcgaaagcctc
tacaacgccatgctgccggaaatcgtagcggacctgaaagccaaagggctggcggtggaa
agcgaaggcgccaccgtggtctatctggacgagtacaaaaacaaagaaggcgaggcgatg
ggcgtcatcatccagaaaaaggatggcggctacctttataccaccaccgatatcgcctgc
gccaaataccgttatgagaaactgggcgccaaccgtgtgctgtactatatcgactcccgc
cagcatcagcacctgatgcaagcctggagcatcgtgcgtaaagccggttacgtgccggaa
tccgtcagcctggaacaccacatgttcggcatgatgctgggtaaagacggcaaaccgttt
aaaacccgcgccggcggcaccatcaagctgtctgaactgctggacgaagcttacgaacgc
gcgctggcgctaattgccggcaaaaacccggagatggcgcgcggcgaacgggaacaactg
gcgcaagtcgtatcgataggcgcggtcaaatacgccgacctgtcgaaaaaccgcaccacc
gactacatcttcgactgggataacatgctggcgtttgaaggcaacaccgcaccttatatg
cagtatgcctacacccgcgtctcgtctatcttcaaacgcgccggggtggaagaagccggt
ctgacccagccgattgcgctgaccgccgagcatgaacacgcgctggcgacccgtctgctg
caattcgaagaagtggtcaccaccgtcgcccgcgacggcacgccgcatgtgatgtgcgct
tacctgtacgatctggccgggctgttctccggtttttacgaaaactgcccgatcctcaac
gccgacagcgacggcgtgcgtcaaagccgcctcaagctggcgctgctgaccgccaaaacg
ctgaaaaccggcctggatacgctcggcatccagaccgtcgagaagatgtaa

All links

Ontology (5)   
   KEGG BRITE (5)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical substance (6)   
   KEGG COMPOUND (6)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (7)   
   Pfam (7)   
All databases (25)   

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