KEGG   Dickeya dianthicola: DDI_3114
Entry
DDI_3114          CDS       T05141                                 
Name
(GenBank) Ribonuclease HI
  KO
K03469  ribonuclease HI [EC:3.1.26.4]
Organism
ddq  Dickeya dianthicola
Pathway
ddq03030  DNA replication
Brite
KEGG Orthology (KO) [BR:ddq00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    DDI_3114
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:ddq03032]
    DDI_3114
Enzymes [BR:ddq01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.26  Endoribonucleases producing 5'-phosphomonoesters
    3.1.26.4  ribonuclease H
     DDI_3114
DNA replication proteins [BR:ddq03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RNase H
    DDI_3114
 Prokaryotic type
   Elongation factors (bacterial)
    RNase H
     DDI_3114
   Elongation factors (archaeal)
     DDI_3114
SSDB
Motif
Pfam: RNase_H Lipase_GDSL
Other DBs
NCBI-ProteinID: ATO34282
Position
3217821..3218285
AA seq 154 aa
MLKQVEIFTDGSCLGNPGPGGYGALLRYKQHEKTLSAGYRLTTNNRMELMAAIVALETLT
TPCEATISTDSQYVRQGITSWIHNWKKRGWKTAEKKPVKNVDLWQRLDLAIQRHTLHWQW
VKGHAGHPENERCDELARQAASTPTLDDTGYQPE
NT seq 465 nt   +upstreamnt  +downstreamnt
atgctaaaacaggtagagattttcaccgacggatcctgtctcggcaatcccggtccgggt
ggatacggggcgctgctacgttacaagcaacacgaaaaaaccctcagcgcaggctaccgg
ctcaccaccaataaccggatggaattgatggcggcaatcgtcgcgctggaaacactgacc
acgccttgcgaggcgaccatcagcaccgacagccagtacgtccgtcagggcattaccagt
tggatccataactggaaaaagcgcggctggaaaaccgcagagaaaaaaccggtaaaaaac
gtcgacctgtggcaacggctggacttggccattcagcgccataccctgcactggcaatgg
gtgaaaggccatgccggccacccagaaaacgagcgctgtgacgaactggcccgtcaggcc
gccagcacccccacccttgatgacaccggctatcagccggagtag

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (2)   
   Pfam (2)   
All databases (11)   

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