KEGG   Dickeya dianthicola: DDI_3817
Entry
DDI_3817          CDS       T05141                                 
Name
(GenBank) Ribosomal RNA small subunit methyltransferas B
  KO
K03500  16S rRNA (cytosine967-C5)-methyltransferase [EC:2.1.1.176]
Organism
ddq  Dickeya dianthicola
Brite
KEGG Orthology (KO) [BR:ddq00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:ddq03009]
    DDI_3817
Enzymes [BR:ddq01000]
 2. Transferases
  2.1  Transferring one-carbon groups
   2.1.1  Methyltransferases
    2.1.1.176  16S rRNA (cytosine967-C5)-methyltransferase
     DDI_3817
Ribosome biogenesis [BR:ddq03009]
 Prokaryotic type
  rRNA modification factors
   16S rRNA modification factors
    DDI_3817
SSDB
Motif
Pfam: Methyltr_RsmB-F NusB Methyltransf_25 Methyltransf_31 FtsJ MTS Methyltransf_5 Methyltransf_12 Methyltr_RsmF_N Methyltransf_33 Cons_hypoth95 Methyltransf_24 Methyltransf_11 Methyltransf_15 PMI_typeI_hel Methyltransf_18
Other DBs
NCBI-ProteinID: ATO34985
Position
3942633..3943928
AA seq 431 aa
MKSKYNLRSIAATALVQVVEQGQSLSHLLPALQRDISEKDRGLLQEICFGVLRVLPQLDW
YLRQLMAKPLTGKQKVLHYLLMVGLYQLVHTRIPPHAALAETVNGAVALKRPQLKGLING
VLRQFQRQQDELQQRLQNNPARYAHPDWLLQRLKKAYPGQWEHIVEANNQHPPMWLRVNQ
QHHTRSAYLTLLQGKEIVAYPHSFYSDAIRLETPCAVNQLPGFEQGWVTVQDASAQGCIH
WLSPQDHEDILDLCAAPGGKTTHILEAAPHAHVLAVDVDEQRLKRVRENLQRLGQHAEVR
CGDGRTPTEWCGDKLFDRILLDAPCSATGVIRRHPDIKWLRRDSDIAELASLQQAILEAI
WPRLKSGGTLVYATCSILPEENHQQVAAFLQRHPDAALVDTGSPEHPGIQKLPSAEDGDG
FFYAKLVKNGQ
NT seq 1296 nt   +upstreamnt  +downstreamnt
atgaaaagcaaatataatcttcgtagcattgccgccactgctcttgtccaggttgtcgaa
caaggacaatcactcagccacctgctgcctgcgcttcagcgagacatcagtgagaaagat
cgtggcctgctgcaggagatctgctttggcgtattacgcgtattaccacagttggattgg
tatctccgccaactgatggccaaaccgctcaccggcaagcagaaggtactgcattatctg
ttgatggtaggtctttatcagctcgtccatacccgtattcctccccatgctgcgctggcg
gaaacggttaatggcgccgttgccctgaaacggcctcagttgaaagggttgatcaacggc
gtattgcgccagttccagcgacagcaggacgaattgcaacaacggctgcagaacaatccg
gcacgctatgcgcaccccgattggctactgcaacgactgaaaaaggcctatcccgggcaa
tgggagcacatcgtcgaggcgaacaatcagcatccgcccatgtggttacgagtcaaccag
cagcatcatacccggtctgcctatctgacgttactgcagggaaaagagatagtagcttac
cctcattctttctattcggatgcaattcgactggagacaccttgcgctgtcaatcaatta
ccggggttcgagcaaggctgggtcaccgtacaggatgcatcggcgcaaggctgtatccac
tggctgtcaccgcaagaccacgaagacatcctcgatctatgcgccgcgcctggcggcaag
acaactcacatacttgaagccgctccccatgctcacgtacttgccgtcgacgtggatgag
caacggctgaagcgggtcagagaaaatttgcaacgccttggtcagcatgctgaggtcaga
tgtggagatggccgaacaccaacagaatggtgtggagacaagctctttgaccgtattttg
cttgatgctccttgctccgctactggcgtcattcgccgtcacccggatatcaagtggctg
cgccgcgatagcgacattgccgaactggcttctctgcaacaagcaattctggaggctatc
tggccacggcttaaaagcggcggcacgctggtatacgccacctgctctatactaccagag
gaaaatcaccagcaagtggccgcatttctgcaacgccatcccgatgctgcattggttgat
accggcagcccggaacaccctgggattcagaagttaccctcggcagaagatggcgatggt
ttcttttatgcgaagctggtaaaaaacgggcaatag

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (16)   
   Pfam (16)   
All databases (24)   

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