KEGG   Dickeya dianthicola: DDI_3975
Entry
DDI_3975          CDS       T05141                                 
Name
(GenBank) Diaminopimelate epimerase
  KO
K01778  diaminopimelate epimerase [EC:5.1.1.7]
Organism
ddq  Dickeya dianthicola
Pathway
ddq00300  Lysine biosynthesis
ddq00470  D-Amino acid metabolism
ddq01100  Metabolic pathways
ddq01110  Biosynthesis of secondary metabolites
ddq01120  Microbial metabolism in diverse environments
ddq01230  Biosynthesis of amino acids
Module
ddq_M00016  Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:ddq00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00300 Lysine biosynthesis
    DDI_3975
  09106 Metabolism of other amino acids
   00470 D-Amino acid metabolism
    DDI_3975
Enzymes [BR:ddq01000]
 5. Isomerases
  5.1  Racemases and epimerases
   5.1.1  Acting on amino acids and derivatives
    5.1.1.7  diaminopimelate epimerase
     DDI_3975
SSDB
Motif
Pfam: DAP_epimerase PhzC-PhzF
Other DBs
NCBI-ProteinID: ATO35143
Position
complement(4094588..4095397)
AA seq 269 aa
MHGLGNDFMVVDAVTQNVYFSPELIRRLSDRHCGVGFDQLLIVEPPYDPELDFHYRIFNA
DGSEVAQCGNGARCFARFVRLKGLTSKREINVSTHNGRMVLSVTEDELVRVNMGEPNFEP
QQVPFRAAKPEKTYILRVAEHTVLCGAVSMGNPHCVIQVDDVDTAPVETLGPLLESHERF
PERVNIGFMQVVNAGLIRLRVFERGAGETQACGSGACAAVAVGIQQGLLAADVKVQLPGG
ELEIHWDGPGHPLFMTGPATHVYDGFMHL
NT seq 810 nt   +upstreamnt  +downstreamnt
atgcacggtctgggcaatgatttcatggttgtcgatgccgtgacgcagaatgtctacttt
tcaccggagctgatccggcgcctgtcggaccggcattgcggggtggggttcgatcagtta
ttgatcgttgagccgccctacgatcccgaactggattttcattaccgcattttcaatgcc
gacggcagcgaagtggcgcagtgtggcaacggcgctcgctgctttgcccgtttcgtacgc
ctgaaagggttgaccagcaaacgtgagatcaacgtcagcacgcataacggccgcatggtg
ttgtcggtgacggaagacgaactggtgcgggtgaacatgggcgaacccaacttcgaaccg
cagcaggtgccgtttcgcgccgccaagccggaaaaaacctatattttgcgcgtcgccgag
cacacggtgttatgcggcgcggtgtcgatgggcaacccgcattgcgtgattcaggtggac
gatgtggacacggcgccggtggagacgctcgggccgctgctggaaagtcacgaacgtttt
ccggaacgcgttaatatcgggtttatgcaggtggttaacgccggtcttatccggttgcgg
gtgttcgagcgcggcgcgggtgaaacccaggcctgtggcagcggcgcctgtgccgcggtg
gccgtgggcattcagcaagggctgctggcggcggatgtcaaagtacaactgccgggcggc
gaacttgagattcactgggacggccccggtcatccgctgtttatgaccggcccggctacg
catgtttatgatgggtttatgcatctatga

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (9)   
   KEGG PATHWAY (6)   
   KEGG MODULE (3)   
Chemical substance (2)   
   KEGG COMPOUND (2)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (2)   
   Pfam (2)   
All databases (21)   

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