KEGG   Devosia ginsengisoli: FPZ08_06610
Entry
FPZ08_06610       CDS       T06120                                 
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
  KO
K03040  DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
Organism
dea  Devosia ginsengisoli
Pathway
dea03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:dea00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    FPZ08_06610
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:dea03021]
    FPZ08_06610
   03400 DNA repair and recombination proteins [BR:dea03400]
    FPZ08_06610
Enzymes [BR:dea01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     FPZ08_06610
Transcription machinery [BR:dea03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Core subunits
     FPZ08_06610
DNA repair and recombination proteins [BR:dea03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase complex (RNAP)
      FPZ08_06610
SSDB
Motif
Pfam: RNA_pol_A_bac RNA_pol_A_CTD RNA_pol_L Phage_tube_2
Other DBs
NCBI-ProteinID: QDZ10446
UniProt: A0A5B8LQU7
Position
complement(1366141..1367160)
AA seq 339 aa
MTIQRNWQELIKPTKLEIVSGSDNARVASVVAEPLERGYGLTLGNALRRVLLSSLQGAAV
TAIQIDGILHEFSSLPGVREDITDLVLNVKEIALKMGGEGPKRLALSRQGPGAVTAGDIK
VTGDIEVLNPELVICHLDDGAEINIEFTVDTGKGYVAADKNRPEDAPIGYIPVDSLFSPV
RRVSYKVDATRAGESLDKDKLTLQVETNGAVSPEDAVAFAARILQDQLSVFVNFEEPSKE
KAQDSVPELAFNPALLKKVDELELSVRSANCLKNDNIVYIGDLIQKTEAEMLRTPNFGRK
SLNEIKEVLAQMGLHLGMDVANWPPENIDDLAKRYEDHY
NT seq 1020 nt   +upstreamnt  +downstreamnt
gtgacgatccagaggaactggcaagaactgatcaagccgaccaagctggagattgtttcg
ggcagcgacaacgcgcgcgtggcctcggtagttgccgagccgcttgagcgcggttacggg
cttaccctcgggaatgccctgcgtcgcgtgctgctgtcgtcgctccagggcgcggcagtt
accgcaatccagattgacggcatcctgcatgaattctcctcgcttccgggcgtgcgggaa
gacattaccgacctggtcctcaacgtgaaggaaatcgcgttgaagatgggtggcgaaggc
cccaagcgcctcgctctctcccgtcagggcccgggcgctgtcaccgccggcgacatcaag
gtcaccggcgatatcgaagtgctgaatcccgagctggtcatctgccacctcgacgacggc
gccgagatcaatatcgagttcaccgtcgacaccggcaagggctatgtcgcggctgacaag
aaccgtcccgaagacgcgccgatcggctatatcccggtcgactctctgttttccccggtc
cgtcgcgtcagctacaaggtcgatgccacccgcgccggtgagagcctcgacaaggacaag
ctgaccctgcaggtcgagaccaatggtgccgtgtcgccggaagatgccgtggcgttcgcc
gcgcgcattctccaggaccagttgtcggtcttcgtgaacttcgaagagcccagcaaggaa
aaggcccaggattcggttcccgaactggccttcaacccggccctgctcaagaaggtcgac
gagctcgaactgtcggttcgctcggccaactgcctcaagaacgacaacatcgtctatatc
ggcgacctcatccagaagacggaagccgagatgctgcggacgccgaatttcggccgcaag
tcgctcaacgaaatcaaggaagtcctggcacagatggggcttcacctcgggatggacgtg
gccaactggccgcccgagaatatcgatgacctcgccaagcgctacgaagatcactattga

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (4)   
   Pfam (4)   
All databases (14)   

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