KEGG   Deefgea piscis: HQN60_08360
Entry
HQN60_08360       CDS       T06622                                 
Name
(GenBank) RNA polymerase sigma factor
  KO
K03088  RNA polymerase sigma-70 factor, ECF subfamily
Organism
dee  Deefgea piscis
Brite
KEGG Orthology (KO) [BR:dee00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:dee03021]
    HQN60_08360
Transcription machinery [BR:dee03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     HQN60_08360
SSDB
Motif
Pfam: Sigma70_r4_2 Sigma70_r4 Sigma70_r2 GerE CSTF_C HTH_28 HTH_23 Sigma70_ECF UPF0122
Other DBs
NCBI-ProteinID: QKJ66712
UniProt: A0A6M8SN92
Position
1750706..1751272
AA seq 188 aa
MASQQQLNDFLASVERRAWRQAQYAVRDHEHALDIVQDAMLKLATHYADKPASEWPMLFQ
TILQNTIRDFLRRNKLRQFWVSLFSKFSSNSNDETDSADPLSYVPHNSELNPSAEQAVLQ
QQNMALIEEGLALLPARQREAFLLRYWEEMDVQETAQVMGCSEGSVKTHCSRACHTLADW
LKQRGLTL
NT seq 567 nt   +upstreamnt  +downstreamnt
ttggcaagtcagcaacaattgaatgattttttagccagtgtagagcgccgtgcatggcgg
caagctcagtacgccgtgcgcgatcacgagcacgctttggatatagtgcaagatgccatg
ctgaaattagccacacattatgctgacaaaccagcatcagaatggccaatgttatttcaa
actatcttgcaaaatacaatacgagactttcttcgtcgaaataaattgcgtcaattttgg
gtgagtttattctctaaattttcatctaattctaatgatgaaactgactcagctgatccg
ctatcttatgttccgcacaatagcgagctcaatcccagtgcagaacaagccgtattgcag
cagcaaaatatggcgttaatcgaagaaggactggctttattgccagcacgtcaacgtgaa
gccttcttgctgcgttattgggaggagatggatgtgcaagaaaccgcgcaagtgatgggc
tgctctgaaggcagtgttaaaacgcattgttcgcgcgcttgtcataccttggccgattgg
cttaaacaaagggggctcaccctatga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (9)   
   Pfam (9)   
All databases (15)   

Download RDF
DBGET integrated database retrieval system